Vulgatibacter incomptus: AKJ08_0409
Help
Entry
AKJ08_0409 CDS
T04035
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
vin
Vulgatibacter incomptus
Brite
KEGG Orthology (KO) [BR:
vin00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
vin03016
]
AKJ08_0409
Enzymes [BR:
vin01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
AKJ08_0409
Transfer RNA biogenesis [BR:
vin03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
AKJ08_0409
Prokaryotic type
AKJ08_0409
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
DKCLD
TruB-C_2
TruB_C
Motif
Other DBs
NCBI-ProteinID:
AKU90022
UniProt:
A0A0K1P939
LinkDB
All DBs
Position
508198..509118
Genome browser
AA seq
306 aa
AA seq
DB search
MDGILIVDKPEGPTSFDVVKRLRRLGRDRKAGHTGTLDPMATGVLPICLGDATKLVPFVM
EGEKDYEGVVALGVETDTYDATGTPVEERDPSGIGRGDVEAAVAAMVGEYWQTPPMYSAV
KVGGRRLYELARKGEEVERKPRKVRIDSIELLDWDPSAATARIHVRCGKGTYIRSIAHEL
GQTLGVGGHLARLRRLRTGSFPIERAVPFQVVLDVMAAGREAELEAHLVGMRDCLPELPE
IVVDDARARKVLHGMALGGRDLAECGSRRLEDGAQVRVVAPDGGLLAVGEMERGGLRYAR
VLVGRG
NT seq
921 nt
NT seq
+upstream
nt +downstream
nt
atggacggcatcctcatcgtcgacaaacccgaaggtcccacctccttcgacgtggtgaag
cggctccgccgtctgggccgcgatcgcaaggcgggccacacgggcaccctcgatccgatg
gcaacgggcgtgctcccgatctgcctcggagacgcgaccaagctcgtgcccttcgtgatg
gagggcgagaaggactacgagggcgtcgtcgcgctcggtgtcgagaccgacacctacgac
gccacggggaccccggtggaggagcgcgacccgtccggcatcgggcggggcgacgtggag
gcggcggtggccgccatggtcggcgagtactggcaaacgccgccgatgtactccgcggtg
aaggtcggcgggcgcaggctctacgagctcgcgcgcaagggggaggaggtcgagcggaag
ccgcgcaaggtgcggatcgactccatcgagctgctcgactgggatccgtccgccgcgacg
gcgaggatccacgtccgctgcggcaaggggacgtacatccgctcgatcgctcacgagctg
ggccagaccctcggcgtcggcgggcacctggcccgccttcgtcgcctccgtaccggctcg
ttcccgatcgagcgggccgtcccgttccaggtggtgctcgacgtcatggccgccgggcgg
gaggccgagctcgaggcccacctcgtcggcatgcgcgattgcttgcccgagctccccgag
atcgtggtggacgacgcccgggcgcggaaggtccttcacgggatggcgctgggcggtcgc
gacctcgccgagtgcgggtcgaggcggctggaggacggggcgcaggtccgggtcgtcgcg
ccggacggcgggctcctcgcggtcggcgagatggagcggggcggccttcgctacgcgagg
gtcctggtcgggaggggttga
DBGET
integrated database retrieval system
