Vulgatibacter incomptus: AKJ08_0599
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Entry
AKJ08_0599 CDS
T04035
Name
(GenBank) ATP-dependent DNA helicase Rep
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
vin
Vulgatibacter incomptus
Pathway
vin03420
Nucleotide excision repair
vin03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
vin00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
AKJ08_0599
03430 Mismatch repair
AKJ08_0599
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
vin03400
]
AKJ08_0599
Enzymes [BR:
vin01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
AKJ08_0599
DNA repair and recombination proteins [BR:
vin03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
AKJ08_0599
MMR (mismatch excision repair)
Other MMR factors
AKJ08_0599
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
Viral_helicase1
AAA_30
AAA_22
AAA_11
ResIII
Motif
Other DBs
NCBI-ProteinID:
AKU90212
UniProt:
A0A0K1P9N9
LinkDB
All DBs
Position
727455..729488
Genome browser
AA seq
677 aa
AA seq
DB search
MIDLSTLNPPQREAVITTEGPLLVLAGAGSGKTRVIVHRIAWILQQGNPATSVLAMTFTN
KAASEMRERVGQLVSSRKSKELTLGTFHAFGLHLLRQEHKRIGYPRQFTIADAGDQAALV
KRAMREVKIDDRSFDPRRILGLLSLAKCEGIQPGEPIARPGRPTIHGEEYELVAEEVYPR
YESALRAMAMVDFDDLIGLPIKLLREHQELRDRLNDRFRYLLVDEYQDTNRTQLELLKLL
GLPRGNVCAVGDDDQAIYGWRGAEVENILRFHLHFPGAKEVRLEQNYRSFGNILDCANEV
IAKNEARKVKALFTERGGGEKVRVVTCPNDEAEARFAVGELRASIAGGRRPGDHAILYRT
NLQSRAFEEVLRAEGVPYEVVGGTEFFDRREVKDLLAYLRLFVNNGDEVSLLRIVNFPAR
GIGDATMEKVRHRATVEALPLLKAMRKAAAGAWPEVAPAAGRIQAFVEIVDRYSNRLVEG
EPASRLARELCEEVDLRGAIASQMTSAAAASRRIGLIDETLVSLERFEAREGKKHSLAQY
LAQLTLDRRDDEPALPGDRVVMMTLHAAKGLEFPVVFLAGLEEDLLPHKGIQGGPQDLPE
ERRLAYVGITRARERLFLTRSAARLSRGKEVPRTPSRFLSDLPGHAIEEIDIAQPTEASE
LRSETFFDELLARLESR
NT seq
2034 nt
NT seq
+upstream
nt +downstream
nt
atgatcgacctctccaccctgaatcctccccagcgcgaagccgtgatcaccaccgagggg
ccgctcctcgtgctcgccggcgcaggctccggcaagacgcgcgtgatcgtccatcggatc
gcctggatcctccagcagggaaatcccgccacctccgtcctggcgatgaccttcaccaac
aaggccgccagcgagatgcgcgaacgggtggggcagctcgtctcgtcgcgcaagtccaag
gagctcaccctcggcaccttccacgccttcgggctccacctcctccgccaggagcacaag
cgcatcggctacccgcggcagttcactatcgccgacgcgggcgaccaggcggcgctggtg
aagcgcgccatgcgggaggtgaagatcgacgaccggagcttcgatccccgccgcatcctg
ggtctgctctcgctggcgaagtgcgaggggatccagccgggggagccgatcgccaggcct
gggcggccgacgatccacggggaggagtacgagctcgtggcggaggaggtctacccgcga
tacgagagcgcgctgcgcgccatggcgatggtcgacttcgacgacctcatcggcctgccg
atcaagctcctccgcgagcaccaggagctgcgcgaccgcctcaacgatcgcttccgctac
ctgctggtggacgagtaccaggacacgaaccgcacgcagctcgagctcctcaagctcctg
ggcctgcccaggggcaacgtctgcgccgtgggcgacgacgatcaggcgatctacggctgg
cgcggcgccgaggtggagaacatcctccgcttccacctgcacttcccgggggcgaaggag
gtccgcctcgagcagaactaccgctccttcgggaacatcctcgactgcgcgaacgaggtg
atcgcgaagaacgaggcacgcaaggtaaaggctctgtttaccgagcgtggaggcggcgag
aaggtgcgggtggtgacctgcccgaatgacgaggcggaggcccgcttcgccgtgggcgag
ctccgggcctcgatcgccggcggccggaggcccggcgatcacgcgatcctctaccggacc
aacctgcagtcgcgcgccttcgaggaggtgctgcgggccgagggcgtgccctacgaggtg
gtgggcggcaccgagttcttcgaccgccgggaggtgaaggatctcctcgcctacctgcgc
ctcttcgtgaacaacggcgacgaggtctcgctcctgcggatcgtgaacttccccgcccgc
gggatcggcgacgccaccatggagaaggtgcggcaccgggccaccgtggaggcgctcccg
ctcctgaaggcgatgcgcaaggccgccgccggcgcgtggcccgaggtggcgccggccgca
ggccgcatccaggccttcgtcgagatcgtcgatcgctactcgaaccgcctcgtggagggc
gagccggcctcgcgcctcgcgagggagctctgcgaggaggtcgatctgcggggcgcgatc
gcgtcccagatgacctcggccgccgccgcgtcgcgccggatcggcctcatcgacgagacc
ctggtgtcactggagcgcttcgaggcacgggaaggcaagaagcacagcctcgcgcagtac
ctggcccagctcaccctggaccggcgggacgacgagcccgcgctccccggcgatcgcgtg
gtgatgatgaccctccacgcggcaaaggggctggagttccccgtggtcttcctcgcgggc
ctcgaggaggacctgctgccgcacaagggcatccagggcgggccccaggatctcccggag
gagcgccgcctcgcctacgtgggcatcacgcgggcccgcgagcgcctcttcctcacccgg
agcgccgcccgcctgagccgcgggaaggaggtcccgcgcacgccctcccgcttcctctcc
gacctcccggggcacgcgatcgaggagatcgacatcgcgcagccgaccgaggcgtcggag
ctaaggagcgaaacgttcttcgatgagcttctcgcgcggctcgaatcgcggtag
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