Vulgatibacter incomptus: AKJ08_0793
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Entry
AKJ08_0793 CDS
T04035
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
vin
Vulgatibacter incomptus
Pathway
vin03030
DNA replication
vin03410
Base excision repair
vin03420
Nucleotide excision repair
vin03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
vin00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
AKJ08_0793
03410 Base excision repair
AKJ08_0793
03420 Nucleotide excision repair
AKJ08_0793
03440 Homologous recombination
AKJ08_0793
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
vin03032
]
AKJ08_0793
03400 DNA repair and recombination proteins [BR:
vin03400
]
AKJ08_0793
Enzymes [BR:
vin01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
AKJ08_0793
DNA replication proteins [BR:
vin03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
AKJ08_0793
DNA repair and recombination proteins [BR:
vin03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
AKJ08_0793
NER (nucleotide excision repair)
GGR (global genome repair) factors
AKJ08_0793
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
5_3_exonuc
HHH_2
HHH
HHH_5
SNF5
Motif
Other DBs
NCBI-ProteinID:
AKU90406
UniProt:
A0A0K1PAG5
LinkDB
All DBs
Position
947964..950798
Genome browser
AA seq
944 aa
AA seq
DB search
MDGQRQRARSRHDGTAPRSRPSRTLTAWKGLCYTLRMSTERQTLTLIDGSAYIFRAYHAI
RSELTTSKGLPTRAVFGFARMMLKSLREASPTHVAVVWDKDGRALRQKIDPEYKAHRPST
PEDLKVQFPYIRQVVDALAVPSVEKEGWEADDLIATLSKEAVAAGFDVVIVTGDKDFSQI
VGPHVRLYDGMMDKWTGPAEVEAKWGVPPERFLELQALLGDSVDNIPGIPGVGEKTAAEL
VARFGDAQSVIAACERGEVSKKKVAASIVEGRERIATNRELARLRDDVELPMTPAELVRR
QPDPAAVQQLFRELEFFALLRELPGLLAELPPGEAAAVAPTVMAAPTFEPPPTLLVTDSD
ALASLVARIREAESVGLRAAAPDEAVHDGAFAGLAVAIPGGPSAYLPLAHRGIFAGPQLP
RDVVLRAIGDALAGKRWTGTETGRDLALLLGTGLTVDGPAGDAAIASYLLNPARRTFAVT
DLSREKLGFDLAEPASFVGTGKDRKAFADLEPAVVGQWMGAAAACAIEIEAALAKELGPL
ETIYRELELPLVPILARMEAAGVRLDIELLRSLDRELEGMLAKRLAECFAAAGHEFNVAS
PKQLAQVLFEELKLPVQKRTKTGPSTDHEVLEKLSEQHPLPGLILEHRSLAKLKGTYVEA
LPRLVGRDGRLHTTFDQTNTATGRLASLEPNLMNIPIRTELGKRIREAFVADEGSALISA
DYSQIELRILAHVTGDPGLVEALRAGADVHRRTAAEVFGVDEGAVTSDQRRIAKMINYAV
AYGLSAFGLSTRLDIPPGEASAIIQRYFEKYAGVKAWIDRIVAEAKVNGFVSTLDGRRRF
LPDLQSRNPALRQAAERAAINMPIQGTAADIIKRAMIVLDAELRRSSGGARLLLQVHDEL
VLEVPEAEVADVSELVRRTMEGAASLAVPLVVDVSHGPNWAAAH
NT seq
2835 nt
NT seq
+upstream
nt +downstream
nt
gtggacgggcaacgccaacgtgccaggtctcggcacgacgggaccgctcctcggtctcgt
ccgtcgcggacgcttacggcatggaaaggcctctgctataccctccgaatgtcgaccgag
cgccagaccctcaccctgatcgacggatccgcctacatcttccgcgcgtaccacgcgatc
cgctccgagctgacaacgtcgaagggcctgccgacccgcgcggtcttcggcttcgcgcgg
atgatgctcaagtcgctgcgcgaggcgtcgcccacccacgtggccgtagtctgggacaag
gatggccgcgcgctgcgccagaagatcgaccccgagtacaaggcccaccgcccctcgacg
cccgaggatctgaaggtccagttcccctacatccggcaggtggtcgacgccctcgcggtc
cccagcgtggagaaggaaggctgggaggccgacgacctgatcgccacgctgtcgaaggaa
gcggtggcggcgggcttcgacgtggtgatcgtcaccggcgacaaggacttctcccagatc
gtgggcccccacgtgcggctctacgacgggatgatggacaagtggaccggcccggcggag
gtcgaggcgaagtggggggtgcctcccgagcggttcctcgagctccaggccctcctcggc
gactcggtggacaacatccccgggatcccgggcgtcggcgaaaagacggcggcagagctg
gtggcgcggttcggcgacgcgcagagcgtgatcgcggcctgcgagcgcggcgaggtgtcg
aagaagaaggtcgctgcctccatcgtggaggggcgcgagcggatcgccacgaaccgggag
ctcgcgaggctgcgggacgacgtcgagctgccgatgaccccggcggagctcgtcaggcgg
cagcccgatcccgccgccgtccagcagctcttccgggagctcgagttcttcgccctcctg
cgggagctgccgggcctgctcgccgagctgcctccgggagaggccgccgccgtagcaccc
acggtgatggccgccccgactttcgagccgcctcccacgctcctggtgacggattcggac
gcgctcgcctcgctggtcgcgcggatccgggaggcggagagcgtcgggctccgggcggcg
gcgccggacgaagccgtccacgacggggccttcgccggactcgccgtggcgatccctggc
ggtcccagcgcgtatctcccgctggcgcatcgggggatcttcgcagggccgcagcttccc
cgcgacgtggtcctgcgcgcgatcggcgacgccctcgccggaaagcggtggaccggcacc
gagaccggccgcgacctggcgctcctccttggcacgggcctcaccgtcgatggacccgcg
ggtgacgccgcgatcgcctcctatctgctgaacccggcgcgtcgcaccttcgcggtgacg
gatctcagcagggagaagctgggcttcgacctcgcagagcccgcgtcgttcgtcggaacg
gggaaagaccgcaaggccttcgccgacctcgagcccgcggtggtcggtcagtggatgggc
gccgccgcggcgtgtgccatcgagatcgaggcggccctggcgaaggagctcggccccctc
gagacgatctaccgcgagctggagctgccgctggtgccgatcctcgcccggatggaggcc
gctggggtgcggctcgacatcgagctgctccggtcgctggaccgcgagctcgagggcatg
ctcgcgaagcggctcgccgagtgcttcgcggcggcaggccacgagttcaacgtcgcctcg
cccaagcagctcgcccaggtcctcttcgaggagctgaagctgccggtgcagaagcggacc
aagacggggccgtccaccgatcacgaggtgctcgagaagctctccgagcagcacccgctc
ccgggcctgatcctcgagcaccgctcgctcgccaagctcaagggcacctacgtggaggcg
ctgccgcggttggtcgggcgcgacgggcgcctccacaccaccttcgatcagacgaacacg
gccaccgggcggctcgcctccctcgagccgaacctgatgaacatcccgatccgcaccgag
ctcgggaagcggatccgcgaggccttcgtcgcagacgagggctccgcgctgatctctgcg
gactactcgcagatcgagctgcggattctcgcccacgtcaccggggatccgggcctggtg
gaggcgctgcgggccggggcggacgtccaccgccgcacggccgccgaggtcttcggcgtg
gacgagggcgcggtcacgtccgatcagcgccggatcgcgaagatgatcaactacgcggtg
gcctacggcctctccgcgttcggcctctccacccggctggacatcccgcccggcgaggcc
tcggcgatcatccagcgctacttcgagaaatacgccggcgtgaaggcgtggatcgatcgg
atcgtcgccgaggcgaaggtcaacggcttcgtctccacgctggacggccggcgccgcttc
ctgcccgacctccagtcgcgaaacccggcgctgcggcaggcggcggagcgcgcggcgatc
aacatgccgatccagggcaccgccgcagacatcatcaagcgcgcgatgatcgtgctggac
gccgagctgcgacgctcgtcgggcggggcgcggctcctgctgcaggtgcacgacgagctc
gtgctcgaggtgcccgaagcggaggtcgcggacgtgagcgagctagtccgccggacgatg
gagggcgccgcctccctcgccgtgcccctcgtcgtcgacgtctcccacggcccgaactgg
gccgccgctcactga
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