KEGG   Vulgatibacter incomptus: AKJ08_0840
Entry
AKJ08_0840        CDS       T04035                                 
Name
(GenBank) 3'->5' exoribonuclease Bsu YhaM
  KO
K03698  3'-5' exoribonuclease [EC:3.1.-.-]
Organism
vin  Vulgatibacter incomptus
Brite
KEGG Orthology (KO) [BR:vin00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:vin03019]
    AKJ08_0840
Messenger RNA biogenesis [BR:vin03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     AKJ08_0840
SSDB
Motif
Pfam: HD tRNA_anti-codon TraI_2 Cas3_HD HDOD tRNA_anti_2
Other DBs
NCBI-ProteinID: AKU90453
UniProt: A0A0K1PA88
LinkDB
Position
complement(1003949..1005379)
AA seq 476 aa
MDRLWVKDVEAGRRAEGVFLVARKQQATGKNGKVFLKLLLQDKTGQLDARVWNTTDEVLG
AFEAGDRVEVGGQVGSFQGRPQLTVEKIEKSLAELDPADFAFEAPAVEAPAAERDGAFQA
LRGELHRVSDPHVRALLLSFVDDPGIASKLRRAPAAKEIHHAYPGGLLEHILSCVRLAGR
LADQYPMADRDLLIAGAFLHDIGKVSELSYDKGATGYTDEGRLIGHLVMTATWIAERARA
ITGFPKELELHLVHMVLAHHGRLEYGSPKLPMTLEAFLVHALDEIDSRVNAMLGQMARSP
GQRWAEPQKAHERLVWKAPAPTEGGRKRGAPAKGLGKRKGGPEAPQEKPKEKQKREPAPE
GGEGPRRAAGGAQAERPRRERPPREREAREREPREPAAAEPVAAEGERPLREGEERRGPK
ILKRAEGAPKAAGGEKLTFKPFSAFTGGEEPTPSEGPTPAEERPAEEGSGELPQAE
NT seq 1431 nt   +upstreamnt  +downstreamnt
atggacaggctgtgggtcaaggacgtcgaggcgggccgtcgagcggaaggcgtcttcctc
gtggcgcgcaagcagcaggccaccgggaagaatggaaaggtcttcctcaagctcctgctc
caggacaagaccggccagctcgacgcgcgggtgtggaacaccaccgacgaggttctgggc
gccttcgaggcgggagatcgggtggaggtcggtggacaggtcggctccttccagggtcgc
ccgcagctaacggtcgagaagattgaaaaatccctggccgagctcgacccggccgacttc
gccttcgaggcgccggccgtggaggcccccgcggccgagcgggacggggcgttccaggcg
ctccgcggagagctgcaccgggtctcggatccgcacgtccgcgccctcctcctctcgttc
gtcgacgatccagggatcgcctcgaagctgcgccgcgcgccggcggcgaaggagatccac
catgcctacccggggggtcttctcgagcacatcctctcctgcgtgcggctggcaggccgc
ctggcggaccagtatccgatggcggatcgcgatctcctgatcgcgggcgccttcctccac
gatatcggcaaggtctccgagctctcctacgacaagggcgccacgggatatacggatgag
gggcgcctgatcggccacctggtgatgacggccacgtggatcgccgagcgcgcccgggcg
atcaccggcttccccaaggagctcgagcttcacctggtgcacatggtgctcgcacaccac
ggccgcctcgagtacggctcgcccaagctcccgatgaccctcgaggccttcctggtccac
gctctcgacgagatcgacagccgggtgaacgccatgctcgggcagatggcgcgcagcccc
ggccagcggtgggccgagccgcagaaggcccacgagcgcctcgtctggaaggcgccggcc
cccaccgagggcggccgcaagcggggtgcccccgccaagggcctcggcaagcgcaagggt
ggccccgaggcgccccaggagaagccgaaggaaaagcagaagcgggaacccgcccccgag
ggcggcgagggccctcgccgtgccgctggtggcgcgcaggcggagcgtccccgccgcgag
cgtccgcctcgtgagagggaggcgcgagagagggagccgcgggagcccgccgccgccgag
cccgtcgcggccgagggcgagaggcccttgcgcgagggcgaggagcgtcgcggcccgaag
atcctgaagcgcgccgagggcgcgccgaaggccgccggcggcgagaagctcaccttcaag
cccttctccgccttcacgggcggggaggagccgactccctccgaagggccgaccccggcc
gaggagcgccccgccgaggagggctccggcgagctaccccaggcggaatag

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