Vulgatibacter incomptus: AKJ08_1627
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Entry
AKJ08_1627 CDS
T04035
Name
(GenBank) Serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
vin
Vulgatibacter incomptus
Pathway
vin00260
Glycine, serine and threonine metabolism
vin00460
Cyanoamino acid metabolism
vin00630
Glyoxylate and dicarboxylate metabolism
vin00670
One carbon pool by folate
vin00680
Methane metabolism
vin01100
Metabolic pathways
vin01110
Biosynthesis of secondary metabolites
vin01120
Microbial metabolism in diverse environments
vin01200
Carbon metabolism
vin01230
Biosynthesis of amino acids
vin01240
Biosynthesis of cofactors
vin04981
Folate transport and metabolism
Module
vin_M00140
C1-unit interconversion, prokaryotes
Brite
KEGG Orthology (KO) [BR:
vin00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
AKJ08_1627
09102 Energy metabolism
00680 Methane metabolism
AKJ08_1627
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
AKJ08_1627
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
AKJ08_1627
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
AKJ08_1627
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
AKJ08_1627
Enzymes [BR:
vin01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
AKJ08_1627
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Gene cluster
GFIT
Motif
Pfam:
SHMT
Aminotran_1_2
Beta_elim_lyase
ACP_syn_III
OKR_DC_1
Motif
Other DBs
NCBI-ProteinID:
AKU91240
UniProt:
A0A0K1PCK2
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All DBs
Position
complement(1944530..1945780)
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AA seq
416 aa
AA seq
DB search
MTPHDRSLAEIDPAIAGLVRQEAERQAHGLELIASENFVSRAVLEAVGSVLTNKYAEGYP
GKRYYGGCEVVDEVEQLAIDRAKQLFGAEHANVQPHSGSGANMAAYFAVAKPGDKILALD
LNAGGHLTHGAKPNFSGKLFDVISYGLTPDEIIDYDAVDRLAQEHRPKVIVVGASAYPRI
IDFQRFRKAADACGAVMLVDMAHIAGLVATGLHPSPVPLAELVTSTTHKTLRGPRGGLIL
CKEAYAKTLNSQIFPGIQGGPLEHVIAGKAVAFLEALRPDFKAYQQRIVDNAQALAKGLV
SAGLRLVSGGTDNHLMLVDLRPKRTTGNVAEVALGKAGITVNKNMIPNDPEKPMVTSGIR
IGTPAVSTRGMGAPEMVEIAGLIGEALDAPEDDAHLARIRGRVLELARRFPLYGLP
NT seq
1251 nt
NT seq
+upstream
nt +downstream
nt
atgaccccccacgatcgcagcctcgccgagatcgatccggccatcgccggcctggtccgc
caggaggccgagaggcaggcccacggcctcgagctgatcgccagcgagaacttcgtgtcc
cgcgccgtcctcgaggcggtgggaagcgtcctcaccaacaagtacgccgaaggctacccc
ggcaagcgctactacggcggctgcgaggtggtcgacgaggtggagcagctcgcgatcgat
cgcgcgaagcagctcttcggcgccgagcacgcgaacgtgcagccgcactcgggctccggc
gcgaacatggcggcgtactttgcggtggcgaagcccggggacaagatcctcgcgctcgac
ctgaatgcaggcggccacctcacccacggcgccaagcccaacttctcgggcaagctcttc
gacgtgatctcctacggcctcacgcccgacgagatcatcgactacgacgcggtcgaccgc
ctcgcccaggagcacaggcccaaggtgatcgtggtgggtgcctcggcgtatccgcggatc
atcgatttccagcgcttccgcaaggcggcggacgcctgcggcgccgtgatgctggtggac
atggcccacatcgcgggactcgtggcgacgggcctccatccctcgccggtgccgctggcg
gagctggtgacctccaccacccacaagaccctccgcggcccccgcggcggcctcatcctc
tgcaaggaagcgtacgcgaagacgctcaactcgcagatcttccccggcatccagggcggt
cccctcgagcacgtgatcgccggcaaggccgtggccttcctcgaggcgctgcgccccgac
ttcaaggcctaccagcagcggatcgtcgacaacgcccaggcgctcgccaagggcctcgtc
agcgcgggtctgcggctggtgtccggcggtacggacaaccacctgatgctggtcgacctc
cgccccaagaggaccaccggcaacgtggccgaggtggcgctggggaaggccgggatcacg
gtgaacaagaacatgatcccgaacgaccccgagaagcccatggtcaccagcgggatccgg
atcgggacgcccgccgtgtccacccgtgggatgggcgcgcccgagatggtcgagatcgcc
ggcctcatcggcgaggccctggacgcccccgaggacgacgcccacctggcgcgaatccgg
ggccgggtgctcgagctcgcccggcgcttcccgctctacgggttgccctga
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