Vulgatibacter incomptus: AKJ08_1738
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Entry
AKJ08_1738 CDS
T04035
Name
(GenBank) RNA polymerase sigma-54 factor RpoN
KO
K03092
RNA polymerase sigma-54 factor
Organism
vin
Vulgatibacter incomptus
Pathway
vin02020
Two-component system
vin02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
vin00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
AKJ08_1738
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
AKJ08_1738
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
vin03021
]
AKJ08_1738
Transcription machinery [BR:
vin03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
AKJ08_1738
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_CBD
Sigma54_DBD
Sigma54_AID
Motif
Other DBs
NCBI-ProteinID:
AKU91351
UniProt:
A0A0K1PD74
LinkDB
All DBs
Position
2077578..2078981
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AA seq
467 aa
AA seq
DB search
MSIELESKVRLDLLPPGPAPSPRIDLLRLSRRELASRIRDEVERNPLLEERTNTLEQDRH
DAVRELSSIERFAAQEDAAAREPLSDPDWEDGVEELAEELLSSEGDPEQELSLLDHLVTQ
MRLTSFSPDEERVSKLILGNLDEDGYFRLEDVEGDPLIAVAGEAEVGLDVAAGALRKLQQ
LEPTGVCARDLEECLLLQARAWGEDRGLVGAIIRKHLPALEARGLRSIASDLDAELGEVI
VAERIIAEMEPRPARAFLADESPFILPDVQVHRSGNEWIVTADDPLARIRISRRYRGSLR
RESPAADFLRENLHAARALIDSVEGRQRILVRMVEAIARLRTELFERGPSAAVPLDARDV
AAEVGLHPSTVLGAAAGKLVATPNGVLPLASFFAPPLDEGMAHVDEVTDELEQEILDLVS
SEPPRRPYSDHQLVELLRVRRLEASRPLVSRCRELLGIPPTSERSRR
NT seq
1404 nt
NT seq
+upstream
nt +downstream
nt
atgtcgatcgagctcgaatccaaggtgcggctggatctcctgcccccgggtccggccccg
tcgccgcgcatcgatctcctccgcctctcccggcgcgagctggccagccggatccgcgac
gaggtcgagcggaatcccctcctggaggagcgaaccaacaccctcgagcaggaccgccac
gacgccgtccgggagctctcgtcgatcgagcgcttcgcggcccaggaagacgccgccgct
cgggagccgctgtcggatccggactgggaggacggggtcgaagagctcgcggaggagctc
ctctcgtccgagggcgatccggagcaggagctctccctcctcgaccatctggtcacgcag
atgcggctgaccagcttcagccccgacgaggaacgggtctcgaagctgatcctcggcaac
ctcgacgaagacggctatttccgcctcgaggacgtcgagggcgatcccctgatcgccgtc
gctggagaggccgaggtcggactggatgtcgcagccggagcgctgaggaagctgcagcag
ctcgagccgaccggcgtctgcgcgcgggacctcgaggagtgcctgctcctgcaggctcgc
gcatggggcgaggaccgagggctggtgggcgcgatcatccgcaagcacctcccggcgctg
gaggcacggggcctgcggtccatcgcgtcggatctcgacgcggagctcggcgaggtgatc
gtggccgagcgcatcatcgcggagatggagccgaggcccgcccgcgccttcctcgccgat
gaatcccccttcatcctccccgacgtccaggtgcatcgatccggcaacgagtggatcgtc
accgccgacgatccgctcgcgcggatccggatcagccgtcgttaccgcggatccctccgc
cgggagagcccggcggcggacttccttcgagagaacctccacgccgccagggccctgatc
gactcggtcgagggtcggcagcggatcctggttcgtatggtcgaggccatcgcgcggctg
cggaccgagctcttcgagagaggaccatccgctgccgttcccctcgacgcccgggacgtc
gccgccgaggtcggcctccatccgtcgacggtcctcggcgccgccgccggcaagctggtc
gccacgcccaacggagtcctgccgctcgcctcgttcttcgcgcctcctctcgacgaaggg
atggcgcacgtcgacgaggtgaccgacgagctcgaacaggagatcctcgatctcgtctcg
tccgagcctccgcggcgcccctactccgaccaccagctcgtcgagctgctccgcgtgcgc
cgactcgaggcgagccggccgctggtttcccgctgccgggagctcctggggatcccaccc
acgagcgagcgaagccgacgctga
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