Vulgatibacter incomptus: AKJ08_1790
Help
Entry
AKJ08_1790 CDS
T04035
Name
(GenBank) Transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
vin
Vulgatibacter incomptus
Pathway
vin03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
vin00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
AKJ08_1790
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
vin03021
]
AKJ08_1790
03019 Messenger RNA biogenesis [BR:
vin03019
]
AKJ08_1790
Transcription machinery [BR:
vin03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
AKJ08_1790
Messenger RNA biogenesis [BR:
vin03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
AKJ08_1790
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
Spore_III_AA
AAA_25
OB_RNB
S1CSD-TOTE-2
AAA_22
NACHT
Motif
Other DBs
NCBI-ProteinID:
AKU91403
UniProt:
A0A0K1PCY5
LinkDB
All DBs
Position
complement(2127168..2128880)
Genome browser
AA seq
570 aa
AA seq
DB search
MTERSSESPTRARSRKATAEKTEPVSAETRPEPAAEPAPRARRGKPRAGPVEAAEPAEAR
APEAEPQAPAAAPAEAAAEARHEERRHAGGGAPRAEIPSPSAPRRALGGKERGRRGRGER
GERGAPGPKAPVFDIEEDQESLAAAELEPGAEEIVINLSELKRLKTAQLAHMAQDLGVEG
PGGMRKQDLIFEILQAQAVKRGRVYGEGTLEVLPDGFGFLRSPDFSYLPGPDDIYVSPSQ
IRRFGLRTGDSISGQVRQPKEGERYFALLKVEAVNFGPPEENAAKVLFDNLTPLYPNRKL
TLEHESVEMTTRIIDLLVPIGKGQRCLIVAPPRAGKTVLLQNMAHAITTNHPEVHLIVLL
IDERPEEVTDMERSVQGEVISSTFDEPATRHVAVAEMVIEKAKRLTETGKDVVILLDSIT
RLARAYNAVVPASGKILSGGVDSNALHKPKRFFGAARNIEEGGSLTIIGTALVDTGSRMD
EVIFEEFKGTGNSEIVLDRKLMEKRIFPTLDINKSGTRKEELLMDQMTLNRVWVLRQLLH
PLSTIDSMEFLLSKLRGTASNVEFLESMIR
NT seq
1713 nt
NT seq
+upstream
nt +downstream
nt
gtgaccgagcgctcctccgaaagccccacccgcgcgcgcagccgcaaggcgaccgccgag
aagaccgagccggtctccgccgagacgcgccccgagcccgcggccgagcctgccccccgc
gcacgccgcggcaagcccagggccgggcccgtcgaagcggcggagcccgccgaggcgcgc
gctcccgaggccgagccccaggctcccgccgcagcgccggcggaggccgcggccgaggct
cgtcacgaggagaggcggcacgccggcggcggggcgccccgggccgagatcccgtcgccg
tcggcaccccggcgggcgctcggaggcaaagagcgcggcaggcgcggacggggagagcgg
ggtgagcggggagcccccgggccgaaggcgccggtcttcgacatcgaggaggatcaggag
agcctcgcggcggccgagctcgagcccggcgccgaagagatcgtgatcaacctctccgag
ctcaagcgcctcaagacggcgcagctcgcgcacatggcgcaggacctcggcgtcgagggt
cccggcggcatgcgcaagcaggatctcatcttcgagatcctccaggcccaggcggtgaag
cgggggagggtgtacggggagggaacactcgaggtgctccccgatggcttcggcttcctg
cgctctcccgacttctcctacctgccgggccccgacgacatctacgtctcgccctcgcag
atccgccgcttcggcctccggaccggcgactcgatcagcgggcaggtgcgccagcccaag
gagggcgagcgctacttcgcgctcctgaaggtcgaggccgtgaacttcggcccgccggag
gagaacgcggcgaaggtcctcttcgacaacctcacgcccctctatcccaaccggaagctc
accctcgagcacgagtcggtggagatgaccacgcggatcatcgacctcctcgtgccgatc
gggaagggccagcgctgcctcatcgtcgcgccgccgagggccggcaagaccgtgctcctg
cagaacatggcgcacgccatcaccaccaaccatccggaggtgcacctgatcgtgctgctc
atcgacgagcggcccgaggaggtcaccgacatggagcggagcgtgcagggcgaggtgatc
tcctcgaccttcgacgagcccgccacccgccacgtcgcggtcgccgagatggtgatcgag
aaggccaagcgcctcaccgagacgggcaaggacgtggtgatcctcctcgactcgatcacg
cgcctcgcgcgggcctacaacgcggtggtcccggcgtccgggaagatcctctcgggcggc
gtcgactccaacgcgctgcacaagcccaagcgcttcttcggcgccgcgcgaaacatcgag
gagggcggctcgctcaccatcatcggcacggccctcgtcgacaccggctcgcgcatggac
gaggtgatcttcgaggagttcaagggcaccggcaactccgagatcgtcctcgaccgcaag
ctgatggagaagcggatcttccccacgctggacatcaacaagtccggcacgcgcaaggag
gagctgctcatggatcagatgaccctgaaccgggtctgggtccttcggcagctcctgcac
ccgctgtccactatcgactcgatggagttcctcctctcgaagctgcggggcaccgcctcg
aacgtggaattcctcgagtccatgattcgttga
DBGET
integrated database retrieval system
