Vulgatibacter incomptus: AKJ08_1836
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Entry
AKJ08_1836 CDS
T04035
Name
(GenBank) RNA polymerase sigma factor RpoH
KO
K03089
RNA polymerase sigma-32 factor
Organism
vin
Vulgatibacter incomptus
Brite
KEGG Orthology (KO) [BR:
vin00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
vin03021
]
AKJ08_1836
Transcription machinery [BR:
vin03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
AKJ08_1836
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
HTH_11
MarR_2
S_100
Motif
Other DBs
NCBI-ProteinID:
AKU91449
UniProt:
A0A0K1PE91
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All DBs
Position
2187660..2188784
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AA seq
374 aa
AA seq
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MSPSKKISKAKESPRARGRRRPDAEPEEDAELVEAEESQELEPSSILEIAGEESDAEVVG
EENPALRARHPALAELDEEDGAEEESSVALSRTDPLARYMQEVNRHPLLSREEEHELAVR
YTKTGEVDAAYRLVASNLRLVVKIAYEYRRAAFNVLDLIQEGNVGLLHAVKKYDPYRGVK
LSSYAAWWIRAYILRFVMDNWRMVKLGTTQAQRKLFFNLRKEQRRLAAEGFEVGPKLLAE
RLGVTEREVEDMDRRLSGDEASLHAPMNDDGDATLGDRLALPARAADETLAHEELKNLLR
AELEELAKDVDERELFILENRMRSDEPLTLQEIGERFGISRERARQIEAKLVARLRERLM
EKVPDLAVLSLGGD
NT seq
1125 nt
NT seq
+upstream
nt +downstream
nt
ttgagcccctccaagaagatctccaaagcgaaggaatcgcccagggcccgcggccgccgt
cgcccggacgccgagccggaggaggacgccgagctcgtcgaggcggaggagagccaggag
ctcgagccgtcctcgatcctcgagatcgcaggagaggagagcgacgccgaggtggtgggc
gaggagaaccccgccctccgggcgcgccacccggcgctcgccgagctggacgaggaggac
ggggccgaggaggagtcctccgtcgccctctcgcgcaccgaccccctcgcccgctacatg
caggaggtcaaccggcatcccctcctttcccgcgaggaggagcacgagctcgcggtccgc
tacaccaagaccggcgaggtcgacgcggcctaccgcctggtggcctcgaacctgcggctg
gtcgtgaagatcgcctacgagtaccggcgcgccgccttcaacgtcctcgacctgatccag
gaggggaacgtcggcctccttcacgcggtgaagaagtacgacccctaccgcggcgtgaag
ctctcctcctacgccgcgtggtggatccgcgcctacatcctccgcttcgtgatggacaac
tggcggatggtgaagctcggcaccacccaggcccagcggaagctcttcttcaacctgcgc
aaggagcagcgccgcctcgcggcggaggggttcgaggtcggccccaagctcctcgcggag
cgcctcggcgtcaccgagcgcgaggtcgaggacatggaccgccgcctctccggcgacgag
gcctccctccacgcgccgatgaacgacgacggcgacgccaccctcggcgaccgcctcgcc
ctccccgcccgcgccgcagacgagaccctcgcccacgaggagctcaagaacctgctccgt
gccgagctcgaggagctggcgaaggacgtcgacgagcgcgagctcttcatcctcgagaac
cggatgcgatccgacgagccgctcaccctgcaggagatcggcgagcgcttcggcatcagc
cgcgagcgcgcccgtcagatcgaggccaagctcgtcgcccgcctgcgcgagcggctcatg
gagaaggtccccgacctcgcggtgctctcgctgggcggcgattga
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