Vulgatibacter incomptus: AKJ08_1857
Help
Entry
AKJ08_1857 CDS
T04035
Name
(GenBank) DNA polymerase III alpha subunit
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
vin
Vulgatibacter incomptus
Pathway
vin03030
DNA replication
vin03430
Mismatch repair
vin03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
vin00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
AKJ08_1857
03430 Mismatch repair
AKJ08_1857
03440 Homologous recombination
AKJ08_1857
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
vin03032
]
AKJ08_1857
03400 DNA repair and recombination proteins [BR:
vin03400
]
AKJ08_1857
Enzymes [BR:
vin01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
AKJ08_1857
DNA replication proteins [BR:
vin03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
AKJ08_1857
DNA repair and recombination proteins [BR:
vin03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
AKJ08_1857
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
Intein_splicing
tRNA_anti-codon
LAGLIDADG_3
PT-HINT
Motif
Other DBs
NCBI-ProteinID:
AKU91470
UniProt:
A0A0K1PD73
LinkDB
All DBs
Position
2208262..2213046
Genome browser
AA seq
1594 aa
AA seq
DB search
MSDFVHLHLHTLYSLLDGAIRMKDLIKGVSEKKMSTVAVTDHGNMFGAVDFYKTAKAAGI
KPIFGCEAYVAGPKGRGDRSERVSNHLVLLAKDQEGWRNLRYLASMGYVEGHYYHPRIDK
QLLKKHSKGLFGLTACLGGEVPQLAKRGDMDGARRAALEYKEIFEPGHFFLEIQSNGMAD
QEIANAELKQLSRDLEIPLAATADAHYVKREDAKAHELLMCIAQGKLYDDPKRMRHETEE
LYIKSPEEMLAHFTDVPEAVENTVLIGQQCNVELELGKVYLPKFRVPDGHDNDSFLAHLA
RTGLDRRFKELEKRYPLDRDEYRRRLEMEIAVIQSMGFSGYFLIVQDFINWSKEHGIPVG
PGRGSGAGSLVAYTLRITDIDPIPYALLFERFLNPERVSMPDFDVDFCQTRRGKVIDYVT
QKYGEDNVGQIITFGQLSAKSAIKDVGRVLGLTFGECNELTKNIPNLVDGKPPTIEKALE
ADPALQERVNGDARIGEVFRIAKALQGLNRQAGMHAAGVVISDKPLWEYVPLYQPSGEKF
LVTQYAKDEVEEAGLVKFDFLGLKTLTVIDDAIAMINENNPGQTPLSPEVIPIDDAKTYE
MLSRGDTQGVFQLESSGFTELLKKLKPDRFEDIVAAVALYRPGPLQSGMVDDFIERKHGR
QKVTYPHPDLEPILRPTYGVIVYQEQVMQISQVLGGYTLGRADLLRRAMGKKKAEVMQQE
RVGFVDGAKNNSVDPKLAGEIFDLMEKFAAYGFNKCVVGETRVVDAHTGALVRVDELFAR
RPAGFETLSLDETTGKMVARRVTDVMQNGVKPVFTVTTAQGKKVTATGNHPFLTKTGWKW
LEELRQGEEIATPRALPLARGASWPRHQLVVLAGMLSGAASRVDGAWEIRLGSEALAEDF
EHAARCFRHTAVTEVRGSRIRIQAPQPFLASGGAAPQLRPAGDCELGTWAKALGVLCHES
TPQPSAQEARGATAAASLPAELFTLRDGDLELFLGRLWSASGTLSSTPLLAVANEGLARD
LQHLLSRLGIVAAVRQGRARETSSRGAEGGADKKRSVSARSAGEELGPASAGPSSSPALA
GWKVKLLGGDAVEAFHHRVGPHLVGREEERRAMAEQILARKRTKRPEDEIHWDEIVSIEP
AGEAITYDLTVDETHNFVADGVIVHNSHSAAYALITMQTAWLKCHHRAEFMAALLTSDAD
KTEKLVAHIADSRDRDLEVLPPDINESARSFNGRGKQIRFGLGGVKGVGETAIDSILEAR
QRKGEDGPFFGLYDFCERVDLRRVNRKVIECLVRCGAFDFTAIPRWRLFGSIERALERGQ
STQRDRASGQSSLFGLLAGPAKAEEKTPGGDGDYPESDPWTDKEKLAGERETLGFYITGH
PLDQYADEIRRVATHTTARVLSSARNGDSVKVVGVVSALRSRPTKTGKLMGFATIEDLTG
TVEVICFAGGRRPGPPGPGRPAARTGGFEVWQPLLETDQPLLVSGTVQLNTRDEENPIAE
LIADDITPLAEVRARHASRFTLTLDADQASADKLQRARALLGQHPGPLTVELHIRIPDRS
TTRVVVRDLKVAPTDELGERLNLLFGARVVGVGA
NT seq
4785 nt
NT seq
+upstream
nt +downstream
nt
atgtccgacttcgtccacctacatctccacaccctctattcgctcctcgacggcgcgatc
cggatgaaggacctgatcaagggggtcagcgagaagaagatgtcgaccgtggccgtgacg
gaccacggcaacatgttcggcgcggtggacttctacaagaccgccaaggccgcggggatc
aagccgatcttcggctgcgaggcctacgtggccgggccgaaggggcgcggggatcgcagc
gaacgggtctcgaaccacctcgtgctccttgcgaaggatcaggaggggtggcggaacctg
cgctacctcgcgtcgatgggctacgtggaggggcactactaccacccgcgtatcgacaag
cagctcctcaagaagcactcgaagggactcttcggcctcaccgcctgcctgggcggcgag
gttccccagctcgcgaagcgcggcgacatggacggcgcccgtcgggcggcgctcgaatac
aaggagatcttcgagccgggacacttcttcctggagatccagtcgaacgggatggcggat
caggagatcgccaacgccgagctgaagcagctctcccgcgacctggaaatccccctcgct
gccaccgcggacgcgcactacgtgaagcgcgaggacgcgaaggcccacgagctcctgatg
tgcatcgcgcaggggaagctctatgacgatcccaagcggatgcgccacgagacggaggag
ctctacatcaagagccccgaggagatgctggcgcacttcaccgacgtccccgaggcggtg
gagaacaccgtcctcatcggccagcagtgcaacgtggagctggagctcggcaaggtctac
ctcccgaagttccgggtgccggacggccacgacaacgacagcttcctcgcgcacctggcg
cggacgggcctcgaccgccgcttcaaggagctggagaagcgctatcccctcgaccgggac
gagtaccggcgccggttggagatggagatcgccgtcatccagtcgatggggttctccggc
tacttcctgatcgtccaggacttcatcaactggtcgaaggagcacgggatcccggtgggg
ccgggccgcggctcgggtgcgggctcgctggtggcgtacaccctgcggatcacggacatc
gatcccatcccctacgccctcctcttcgagcgcttcctcaaccccgagcgcgtctcgatg
ccggacttcgacgtcgacttctgccagacccgccgcgggaaggtgatcgactacgtcacc
cagaagtacggcgaggacaacgtcggccagatcatcaccttcggccagctctcggccaag
agcgcgatcaaggatgtgggccgggtgctcggtctcacctttggtgaatgcaacgagctc
accaagaacatccccaacctcgtcgatggcaagccgcccacgatcgagaaggccctcgag
gcggatcccgcgctgcaggagcgggtgaacggcgacgcgcggatcggcgaggtcttccgg
atcgcgaaggcgctccaggggctgaaccgccaggccggcatgcacgccgcgggcgtggtg
atctcggacaagccgctctgggagtacgtcccgctctaccagccctcgggcgagaagttc
ctggtcacgcagtacgccaaggacgaggtggaggaggcgggcctggtgaagttcgacttc
ctgggcctgaagacgctcaccgtgatcgacgacgcgatcgcgatgatcaacgagaacaac
ccggggcagacgccgctcagccccgaggtgatcccgatcgacgacgcgaagacctacgag
atgctttcccggggagacacccagggcgtcttccagctcgaatcgtcgggcttcaccgag
ctcctcaagaagctcaagccggaccgcttcgaagacatcgtcgccgccgtggcgctctat
cgcccgggcccgctgcagtcgggcatggtcgacgacttcatcgagcgaaagcacgggcgg
cagaaggtcacctacccccaccccgacctggagccgatcctgcgcccgacctacggcgtg
atcgtctaccaggagcaggtgatgcagatctcgcaggtgctcgggggttacaccctgggt
cgcgccgatctgctccgccgcgccatgggcaagaagaaggcggaggtgatgcagcaggag
cgcgtcggcttcgtggacggcgcgaagaacaactcggtcgatccgaagctggccggcgag
atcttcgacctcatggagaagttcgccgcgtacggcttcaacaagtgcgtggtgggcgag
acgcgggtcgtggacgcgcacactggcgcccttgtgcgggtggacgagctcttcgccagg
cgtccggcgggcttcgaaaccctctccctcgacgagaccaccggcaagatggtggcccgc
cgcgtcaccgacgtgatgcagaacggtgtgaagcccgtcttcaccgtcacgacggcccag
ggaaagaaggtgaccgccaccggaaaccaccctttcctcaccaagacgggctggaagtgg
ctcgaggagctgcggcagggagaggagatcgcgacgccgcgagctctgcccctcgccagg
ggcgcctcgtggccgcggcaccagctcgtggtgctggcaggcatgctctccggtgcggct
tcgcgcgtggacggcgcgtgggagatccgcctgggctccgaggcgctggcggaggacttc
gagcacgcggcgcgctgcttccggcacaccgcggtcaccgaggttcgcggctcccggatc
cgcatccaggcgccgcagcctttcctcgcctccggcggcgccgcaccgcagctccggccc
gccggggactgcgagctcgggacctgggccaaagctctcggcgtcctttgccacgaatcg
actccccagccgagcgctcaagaggcccgaggcgctaccgccgcggcctcgctgcccgcc
gagctgttcacgctgcgcgacggcgacctcgagctcttcctcgggcggctctggtccgcg
tcggggacgctctcgtcgacccctctcctcgcggtcgcgaacgaggggctcgcgcgggat
ctccagcacctcctctcccgcctcggcatcgtcgccgccgtgcgccaggggagagctcgt
gaaacgagctctcgcggagccgaaggcggagcagacaagaagaggagcgtttccgcgcgg
agcgcgggtgaagaactcgggcccgcttctgcgggaccgagttcttcacccgctctggcc
gggtggaaggtgaagctcctgggcggcgacgcggtcgaggccttccaccaccgggtgggc
ccgcacctggtgggccgcgaggaggagcgccgtgcgatggcggagcagatcctcgcccgc
aagcgcaccaagaggcccgaggacgagatccactgggacgagatcgtctcgatcgagccc
gccggcgaggcgattacctacgacctcaccgtcgacgagacccacaacttcgtggccgac
ggggtgatcgtccacaactcgcactcggcggcctacgcgctgatcaccatgcagacggcg
tggctcaagtgccaccaccgggccgagttcatggcggcgctcctcacgagcgacgcggac
aagaccgagaagctcgtggcccacatcgcagactcgcgcgaccgcgatctagaggtgctg
ccgcccgacatcaacgagtcggcccgctccttcaacggccgcggcaagcagatccgcttc
ggcctcggcggcgtgaagggagtcggcgagacggcgatcgactcgatcctggaggcccgc
cagcgcaagggcgaggatggccccttcttcggcctctacgacttctgcgagcgggtcgac
ctgcggcgcgtgaaccgcaaagtgatcgagtgcctggtgcgctgcggcgccttcgacttc
accgcgatcccccggtggcgcctctttggctccatcgagcgtgccctcgagagggggcag
tccacgcagcgcgatcgcgccagcggccagtcctcactcttcggcctcctggccggtccg
gcgaaggccgaggagaagacgcccggcggcgacggcgactatcccgagtcggacccgtgg
accgacaaggagaagctcgccggcgagcgcgagaccctcggcttctacatcaccggccat
cccctggatcaatacgcggacgagatccgccgggtcgcgacccacaccaccgcccgggtg
ctctcgagcgccaggaacggagacagcgtcaaggtcgtcggcgtggtctcggccctgcgc
tcgcggccgaccaagacgggcaagctcatgggcttcgccacgatcgaggatctcacgggt
accgtcgaggtgatctgcttcgccggcggaagacggcccgggcctcccggtcccggcagg
cccgcagcccgcaccggcggcttcgaggtctggcagccgctgctggagaccgatcagccc
ctgctcgtgtcggggacggtccagctcaacacgcgcgacgaggagaacccgatcgcggag
ctcatcgcggacgacatcacgccgctcgctgaggtccgggcgcgccacgcgtcccggttc
acgctcacgctcgacgccgatcaggcctccgccgacaagctgcagcgggcccgcgccctc
ctcggccagcatccggggccgctgacggtcgagctccacatccggatcccggatcgctcc
accacgcgcgtcgtcgtccgcgacctgaaggtcgccccgaccgacgagctcggcgagcgg
ctcaacctcctcttcggcgctcgggtggtcggcgtcggcgcctga
DBGET
integrated database retrieval system
