Vulgatibacter incomptus: AKJ08_1927
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Entry
AKJ08_1927 CDS
T04035
Name
(GenBank) UvrD/Rep helicase family protein
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
vin
Vulgatibacter incomptus
Pathway
vin03420
Nucleotide excision repair
vin03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
vin00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
AKJ08_1927
03430 Mismatch repair
AKJ08_1927
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
vin03400
]
AKJ08_1927
Enzymes [BR:
vin01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
AKJ08_1927
DNA repair and recombination proteins [BR:
vin03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
AKJ08_1927
MMR (mismatch excision repair)
Other MMR factors
AKJ08_1927
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD_C_2
UvrD-helicase
UvrD_C
AAA_30
AAA_19
AAA_22
AAA_16
AAA_25
AAA_12
SLFN-g3_helicase
Motif
Other DBs
NCBI-ProteinID:
AKU91540
UniProt:
A0A0K1PDE2
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All DBs
Position
2296953..2299109
Genome browser
AA seq
718 aa
AA seq
DB search
MTPALHPAIAEEEALLARVHAALVSRKSRRSNRVSSDELRELRDEAVEVRAEDASGLLHE
LALKQRLRNLPDRFRENEVSADSPYLGHLRIRDGNEVRDYLLGHATFIDDGIRLVDWRVA
PVAQIFYRYREGDSFEESFPGRDVSGVVELRRVVVIHRGVLVQILGDDFALWRGPDGSWT
SEDRAVFAMSPGGAGSAARPGMLGVGIGEREARTDVTALLDAEQFRAISTPPEEPLLVLG
SAGSGKTTVALHRLARLTAKDPARYPVARSRVVVPEEGLARLSARLLQPIGGGPAQVRTM
DSAFVALANHVFGKLPPLCMEPPALVSSLKRHPALYDALRKRLGGKRDEDGAPSLHREPE
ASNRKEAPSREARAEESGPAPAGPISLFALRRRLATLFTDRTFLGGVVAASGGTLPIPAI
EDTVQHTMKQLAATLDRQLASITDDERKQAIDGRNLAEGTPDELAGSIDVEELPLLLAIL
AWRGALRLPEVSHLVLDEAEDFSLFDLEALAGLVRRTGRVTLAGDEAQQTHASFAGWERS
LATLGVAGASTCRLPVSYRCPRPIAEVAREILGHLAPQAPARASRDGAPVGRFAFPDEAQ
AWLFLSGALRDLVEREPRASVAVIAHDAATARRFHGLVEEIASARLVADGRFTFEPGLDV
TDVDCVKGLEFDYVVVPDATAAAWPETDDGRRRLHVAVTRASHQLWLVSPGTASARLP
NT seq
2157 nt
NT seq
+upstream
nt +downstream
nt
atgacgcccgccctgcaccccgccatcgccgaagaggaggccctcctcgcccgcgtacac
gccgccctcgtctcgcgaaagtcccggcgctcgaatcgggtgtcgtccgacgagctccgg
gagctcagggacgaggcagtggaggtacgggcggaggacgcatcgggcctcctccacgag
ctggcgctgaagcagcggctgcggaacctgccggatcgcttccgcgagaacgaggtctcg
gccgactcgccctacctcgggcacctgcggatccgcgacggcaacgaggtccgcgactac
ctcctcggccacgccaccttcatcgacgacgggatccggctggtcgactggcgggtcgcg
ccggtggcgcagatcttctaccgctaccgggaaggggactcgttcgaggagtcctttccg
ggcagggacgtgagcggcgtggtggagcttcgccgggtggtcgtgatccaccggggcgtg
ctggtgcagatcctcggcgacgactttgcgctctggcgaggtcccgatggcagctggacc
tccgaggatcgcgcggtcttcgccatgagccccggcggcgcagggagcgccgcgaggccg
gggatgctcggcgtgggaatcggcgagcgcgaggcccgcaccgacgtcaccgccctcctc
gacgccgagcagttccgggcgatctcgactccgcccgaagagcccctgctggtgctggga
agcgccgggagcggcaagactaccgtggccctccaccgcctcgcgcggctcaccgcgaag
gatccggcgcgctacccggtcgcccgctcccgcgtcgtggttcccgaggaaggcctcgcc
cggctgtcggccagactcctgcagcccatcggcgggggcccggcccaggtccggaccatg
gactcggccttcgtcgccctggccaaccacgtattcggcaagctccctccgctctgcatg
gagccccctgccctcgtctccagcctgaagcggcacccggccctctacgatgccctccgc
aagcggctcggagggaagcgcgacgaggacggggcgccgtcgctccaccgcgagccggag
gcgagcaatcgaaaagaagcgccctcgcgcgaagcgcgagctgaagaaagcgggcccgca
cccgcgggaccgatttctttattcgcgctccggcggaggctcgccaccctcttcaccgat
cggaccttcctcggcggcgtcgtcgccgcgagcggcggcacgctgccaatccccgccatc
gaggacacggtccagcacacgatgaagcagctcgctgccaccctcgatcggcagctcgcc
tcgatcaccgacgacgaacgcaagcaggccatcgacggcaggaacctcgccgaggggacc
ccggacgagctcgcgggctccatcgacgtggaggagctcccgctgctcctcgcgatcctc
gcgtggaggggagcgctccggctgcccgaggtctcgcacctggtgctcgacgaagcggag
gacttctccctcttcgacctggaggccctcgcgggcctcgtccgccgcaccggccgcgtc
accctcgccggcgacgaggcccagcagacccacgcgagcttcgccgggtgggagcgctcc
ctcgcgaccctcggcgtcgccggcgcgtccacctgccgcctgcccgtctcctaccgctgc
ccgaggcccatcgccgaggtcgcccgagagattctggggcatctcgcgccgcaggcgccg
gcacgcgcctcccgcgacggggcgccggtgggacgcttcgccttccccgacgaggcgcag
gcgtggctcttcctctcgggcgccctgcgggatctcgtcgagcgggagccccgcgcgtcg
gtggcggtgatcgcccacgacgctgccacggcccggcgcttccacggcctcgtggaggag
atcgcctccgcccggctcgtcgccgacggcaggttcaccttcgagccaggcctcgacgtc
accgacgtcgactgcgtgaagggcctcgagttcgactacgtggtggtgcccgacgcgacc
gccgcggcctggcccgagacggacgacggccggaggcgcctccacgtcgcggtcacccgt
gcgtcacaccagctctggctggtctcgccggggacggcttcggcccgcctgccctga
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