Vulgatibacter incomptus: AKJ08_1949
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Entry
AKJ08_1949 CDS
T04035
Name
(GenBank) DNA-directed RNA polymerase alpha subunit
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
vin
Vulgatibacter incomptus
Pathway
vin03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
vin00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
AKJ08_1949
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
vin03021
]
AKJ08_1949
03400 DNA repair and recombination proteins [BR:
vin03400
]
AKJ08_1949
Enzymes [BR:
vin01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
AKJ08_1949
Transcription machinery [BR:
vin03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
AKJ08_1949
DNA repair and recombination proteins [BR:
vin03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
AKJ08_1949
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
HHH_XRCC3_RpoA
Motif
Other DBs
NCBI-ProteinID:
AKU91562
UniProt:
A0A0K1PDI3
LinkDB
All DBs
Position
complement(2331737..2332762)
Genome browser
AA seq
341 aa
AA seq
DB search
MADATVAKNWRDLIKPRGIQVDHESLTNTYGKFVAEPLERGFGITLGNSLRRILLSSLQG
AAITSIKIEGVDHEFSTVPEVSEDVTDIILNLKEVRLRMHTLETRTLRLEVDGPKEVTAG
DLVTDPQVEVLNPGHHIATVAEGGKLRVEMTCRRGRGYVPAERNKVAGQPIGTIPIDALF
SPVKRVNYQVTNARVGQQTDYDKLSLEVWTDGSVEPADAVAYAAKIVKEQLSIFINFDET
EEPTPAELMPQEEEKLNENLFRSVDELELSVRSANCLQNANIKTIGELVQRSEAEMLKTK
NFGRKSLKEIKEILSEMGLSLGMKLENWPNRAPGGAAAPKL
NT seq
1026 nt
NT seq
+upstream
nt +downstream
nt
atggccgatgccacggtagcaaagaactggcgcgatctgatcaagccgcgcggaatccag
gtcgaccacgagtcgctcacgaacacctacgggaagttcgtggccgagccgctcgagcgg
ggcttcgggatcaccctgggcaactcgctccggcggatcctgctctcctctctgcaggga
gcggcgatcacctcgatcaagatcgagggcgtggaccacgagttctcgactgtccccgag
gtctccgaggacgtcacggacatcatcctgaacctcaaggaggtccgtctccggatgcac
acgctggagacccggaccctccgcctcgaggtggatgggcccaaggaggtcaccgctggt
gacctcgtgaccgatccccaggtcgaggtgctcaacccgggccaccacatcgcgacggtg
gccgagggcgggaagctccgcgtcgagatgacctgccgccgtggcaggggctatgtccct
gcggagcggaacaaggtcgcgggccagccgatcgggaccatccccatcgacgcgctcttc
tcgccggtgaagagggtcaactaccaggtgaccaacgcccgcgtcggtcagcagacggat
tacgacaagctctcgctcgaggtctggaccgacggctcggtcgagcccgccgacgccgtg
gcctatgcggcgaagatcgtgaaggagcagctctcgatcttcatcaacttcgacgagacc
gaggagcctactcccgccgagctcatgccgcaggaggaggagaagctcaacgagaacctc
ttccgttccgtggacgagctcgaactctccgtccggtcggccaactgcctgcagaacgcc
aacatcaagacgatcggcgagctggtgcagaggtccgaggccgagatgctcaagaccaag
aacttcggtcggaagagcctcaaggagatcaaggagatcctgtcggagatggggctctcc
ctcggcatgaagctggagaactggccgaaccgcgccccgggtggtgcggccgcgccgaag
ctgtag
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