Vulgatibacter incomptus: AKJ08_2458
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Entry
AKJ08_2458 CDS
T04035
Name
(GenBank) Transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
vin
Vulgatibacter incomptus
Pathway
vin03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
vin00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
AKJ08_2458
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
vin03021
]
AKJ08_2458
03019 Messenger RNA biogenesis [BR:
vin03019
]
AKJ08_2458
Transcription machinery [BR:
vin03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
AKJ08_2458
Messenger RNA biogenesis [BR:
vin03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
AKJ08_2458
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATP-synt_ab
Rho_RNA_bind
NACHT
AAA
AAA_22
AAA_25
Spore_III_AA
Motif
Other DBs
NCBI-ProteinID:
AKU92071
UniProt:
A0A0K1PF70
LinkDB
All DBs
Position
2893642..2894961
Genome browser
AA seq
439 aa
AA seq
DB search
MMATNELGAEMSERPESVSGGAASEVGGEGGTAGGPGQEGQRKRRRRRRGKRGTAQPGAP
AGGGQEAAPQAGGQAQLLQVEGILDSEIRGPNAFLRRAEKNYLPTPDDPEVPKHLVQRLR
LRPGARLIAHAQSKGKLVVQRIDTVDGLPPEQAWNRPDFSGLTVIDPVRRIRLETTGKES
LTRVLDLISPIGFGQRALIVAPPKTGKTIMLQRIAQAISTNYPDAHLMVLLVDERPEEVT
DMRRSIKGEVLASSSDRSSADHLKVAEMTLERAKRLVEQGKDVVILLDSITRLARAYNKE
VESSGRTLSGGVDSKALEKPKRIFGAARNCEEGGSLTIIGTALIDTGSRMDEVIFEEFKG
TGNMEVTLDRMLAEKRMFPAINIPQSGTRKEEKLFSQLEYDKVRLLRVALSNYKPVEAME
KLLTKVNEFRSNDEFLNAV
NT seq
1320 nt
NT seq
+upstream
nt +downstream
nt
atgatggcgacgaacgagctgggcgcagagatgagcgagaggccggaatccgtttccggc
ggcgcggcttccgaggttgggggcgaaggcgggacggcgggcggccccggacaggagggc
cagcgcaagcgccggcggcggaggcgcggcaagcgcggcacggcccagccgggcgcccct
gcaggcggcggccaggaggccgcaccgcaggccggtggccaggcgcagctcctgcaggtc
gaggggatcctcgactccgagatccgcggcccgaacgccttccttcgccgagcggagaag
aactacctccccacccccgacgaccccgaggtgcccaagcacctggtccagcggctccgc
ctccggcccggcgcgcgcctcatcgcgcacgcccagtccaagggcaagctggtggtccag
cggatcgacacggtggacggcctccctccggagcaggcctggaaccggcccgacttctcc
ggcctcacggtgattgacccggtccgccggatccgcctggagaccacggggaaggagtcg
ctgacccgggtgctcgacctcatctcgcccatcggcttcgggcagcgcgccctgatcgtc
gccccgcccaagaccggcaagacgatcatgctccagcggatcgcgcaggcgatctccacg
aactaccccgacgcccacctcatggtgctcctcgtggacgagcgtcccgaggaggtcacg
gacatgcggcgctcgatcaagggcgaggtcctcgcctcgtcgtccgaccgctcctccgcg
gaccacctcaaggtggcggagatgaccctggagcgcgccaagcgcctggtcgagcagggc
aaggacgtggtgatcctcctcgactcgatcacccgcctcgcccgcgcctacaacaaggag
gtcgagtcctccggccgcaccctctccggcggcgtggactccaaggccctcgagaagccg
aagcggatcttcggcgccgcccgcaactgcgaagagggcggctcgctgaccatcatcggc
accgcgctgatcgacaccggctcgcggatggacgaggtgatcttcgaggagttcaagggc
accggcaacatggaggtgaccctggaccgcatgctggccgagaagcggatgttccccgcg
atcaacatcccgcagtccggcacgcgcaaggaagagaagctcttctcgcagctcgagtac
gacaaggtccgcctgctccgggtggccctctcgaactacaagcccgtcgaggccatggag
aagctcctcaccaaggtcaacgagttccgttcgaacgacgagttcctcaacgccgtttag
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