Vulgatibacter incomptus: AKJ08_2537
Help
Entry
AKJ08_2537 CDS
T04035
Name
(GenBank) ATP-dependent DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
vin
Vulgatibacter incomptus
Pathway
vin03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
vin00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
AKJ08_2537
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
vin03019
]
AKJ08_2537
03400 DNA repair and recombination proteins [BR:
vin03400
]
AKJ08_2537
Enzymes [BR:
vin01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
AKJ08_2537
Messenger RNA biogenesis [BR:
vin03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
AKJ08_2537
DNA repair and recombination proteins [BR:
vin03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
AKJ08_2537
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
HRDC
Helicase_C
RecQ_Zn_bind
Helicase_Sgs1
ResIII
Melibiase_C
Motif
Other DBs
NCBI-ProteinID:
AKU92150
UniProt:
A0A0K1PF53
LinkDB
All DBs
Position
2997959..2999713
Genome browser
AA seq
584 aa
AA seq
DB search
MEPSHAEIAGALERHFGFAGFRPGQEAVVRSVLAGKPTVAVMPTGAGKSLCYQLPALLLP
GTALIVSPLVALMKDQVDSLSARGIPATFINSSIDDAEKARRLDAVRRGAFKLVYVAPER
FRSAAFVEAIREIEISLYAVDEAHCISQWGHDFRPDYTRLGQVRWVLRPPRTLALTATAT
PEVRDDIVRVLRLKDPKVSVAGFDRPNLFFEVAKVANEHEKLGRIVRSCRDGGGVVYCAT
RRDVEKVAGMLDGRGIRSFAYHAGMGDDDRRRIQDAFMAQDDAVVCATNAFGMGVDKPTI
RFVAHFAIPKAIEAYYQEAGRAGRDGRPARAVLLFNHADVYLQERLVEANHPSAAMVRDV
WKHLRTMGDGELPIGERQVAAAVSASPLQVGSAIKHLERAGHLQRSARGLVVLEPGLEDD
ELRVDFDGIAARRQRELQMVRRMSSYAYHEGCRRSYLLHYFGDEPVPCSGCDVCNGPSEP
PVEELAPAPASRRGRKDRPTAANDEGPYDGEVFAALKELRLSLAKAEGVPPYVVFHDRAL
RAFARALPQTEEAFLSVAGAGPTKWERYGPHILATISQARRSSD
NT seq
1755 nt
NT seq
+upstream
nt +downstream
nt
atggagccctctcatgccgagatcgccggcgcgctcgagcgccacttcggattcgcgggc
ttccgccccggtcaggaagccgtggtccgctcggtcctcgccgggaagccgaccgtcgcg
gtgatgcccaccggagcgggcaagagcctctgctaccagctccccgccctgctcctcccc
gggaccgcgctgatcgtcagcccgctggtggcgctgatgaaggaccaggtcgactcgctc
tccgcccggggcattccggccaccttcatcaactcgtcgatcgacgacgccgaaaaggcg
cgccgcctcgacgccgtcaggcggggcgccttcaagctcgtctacgtggcgccggagcgc
ttccgatcggcggcgttcgtcgaggccatccgggaaatcgagatttcgctctacgcggtg
gacgaggcccactgcatctcccagtggggccacgacttccggccggactacacgaggctc
gggcaggtgcggtgggtgcttcggccgcccaggaccctggcgctcaccgccacggcgacc
ccggaggtccgggacgacatcgtccgagtgctgcggctcaaggatcccaaggtctcggtg
gccggcttcgacaggcccaacctcttcttcgaggtcgcgaaggtcgccaacgagcacgag
aagctcggtcggatcgtccggtcctgccgggacggaggcggggtcgtctattgcgcgacc
cggcgggacgtcgagaaggtggccgggatgctcgatggccgggggatccgcagcttcgcc
taccacgcgggtatgggcgacgacgatcgcaggcggatccaggacgcgttcatggcccag
gacgacgccgtggtctgtgccacgaacgcgttcgggatgggcgtggacaaacccaccatc
cgattcgtggcccactttgccatcccgaaggcgatcgaggcctactaccaggaggccggc
cgcgcgggccgcgatggccgccctgcccgcgccgtcctgctcttcaaccacgccgacgtc
tacctccaggagcgcctggtggaggcgaaccatccgtccgccgccatggtgcgggacgtg
tggaagcatctgcgcaccatgggtgatggcgagctcccgatcggcgagcgacaggtcgcc
gccgcggtctccgcgagcccgctccaggtgggttcggcgatcaagcacctcgagcgggcg
ggccacctccagcgcagcgcccgcggtctcgtcgtcctcgagcccgggctcgaggacgac
gagcttcgggtcgacttcgacgggatcgcggcgaggcggcagcgcgagctccagatggtg
cggcggatgtcgagctacgcgtaccacgagggatgccgccgctcgtacctcctgcactat
ttcggggacgagcccgtgccgtgctcgggctgcgacgtctgcaacgggccgagcgagccg
ccggtcgaagagctcgccccggcgccggcgtcgaggcgcggccgaaaggatcgcccgact
gccgcgaacgacgaaggaccgtacgacggcgaggtcttcgcggcgctcaaggagctccgg
ctctccctggcaaaagcggaaggagtgccgccctacgtggtcttccacgaccgcgcgctc
cgcgccttcgcgcgggcgctgccgcagaccgaggaggccttcctctcggtcgccggcgcc
ggcccgacgaagtgggagcggtacgggccgcacattcttgcgaccatctcgcaggcccgg
cgcagctcggactga
DBGET
integrated database retrieval system
