Vulgatibacter incomptus: AKJ08_2783
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Entry
AKJ08_2783 CDS
T04035
Name
(GenBank) DNA topoisomerase I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
vin
Vulgatibacter incomptus
Brite
KEGG Orthology (KO) [BR:
vin00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
vin03032
]
AKJ08_2783
03400 DNA repair and recombination proteins [BR:
vin03400
]
AKJ08_2783
Enzymes [BR:
vin01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
AKJ08_2783
DNA replication proteins [BR:
vin03032
]
Prokaryotic type
DNA Topoisomerases
AKJ08_2783
DNA repair and recombination proteins [BR:
vin03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
AKJ08_2783
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim_C_rpt
Toprim
MarR_2
Motif
Other DBs
NCBI-ProteinID:
AKU92396
UniProt:
A0A0K1PG51
LinkDB
All DBs
Position
3301681..3304449
Genome browser
AA seq
922 aa
AA seq
DB search
MPMSRNANSRTLVIVESPTKAKTIRKFLPPGYKVEACMGHVRDLPTSAAEIPEKVKKEPW
ARLGVDVDKGFEPLYVVPKKKTKVVRELKDLLKDADHLLLATDEDREGESISWHLLELLK
PKVPFERLVFHEITKDAIHRALENPRSLDDRLVRAQETRRILDRLVGYGLSPLLWSKIAF
GLSAGRVQSVAVHVIVQRERERMAFRKASFWDLLATVSKGERFDARLTHVGANRVATGKD
FDESTGALKKAEGLVHLDEAKAHELRRRLEPLPFVVKSVEEKPVTRRPPPPLITSTMQQE
ANRKLGMSAQETMRVAQSLYERGLITYMRTDSVHLSNEAIHAARGCVESRFGAEYLAPGV
RQYKTSTKGAQEAHEAIRPSTHFTPPKETGLVGRDYDLYELIWMRTVATQMADARQTQIA
VKIEAGDSTFAASGLRIVFPGFLRAYVEGSDDAQAALEERERLLPALKAGDTLRLDKLEA
EGHETKPPPRYTEASLIQLMEKEGIGRPSTFATIVATIIDRGYVVKQANQLVPTFTAFVV
SDLLENHFPDLVDLGFTSQMEQSLDAIAEGQLESQPYLRQFYMGDRGLKTRIDEQASEID
PKDAKLVKLPTELPGVEIHVGKFGPYLELQAGEAEARKASIPDDVAPGDLTSDRVQDILE
KYERREQGIGQDPDTGKPVYLKTGSYGPYVQLGDAADEEKPKRASLPPGVQLQDVDLGLA
LKILELPRLLGTHPADGKEVRAGLGRFGPYVVHDGDFRSLKKDDDVLRVDLARALELLSV
PKGRGRGQAEPLRQVGAHPADGQPIQLYSGRYGFYVKHGDTTATVSKDASFDPQALTVEQ
AVEALAAAPAGKKKRPAARKAASGAKAAASKEKAPAKKSAAPKKKAEASSDAPKAARTTK
SAPSSGNSAAPKKVAARKTTKP
NT seq
2769 nt
NT seq
+upstream
nt +downstream
nt
gtgccgatgtcgcgcaacgcaaacagccggaccctggtgatcgtcgagtctccgaccaag
gcgaagacgatccgcaagttcctgccgcccggctacaaggtcgaggcctgcatgggccac
gtccgcgacctgcccaccagcgccgccgagatccccgagaaggtgaagaaggagccctgg
gcccgcctcggcgtcgacgtggacaagggcttcgagcccctctacgtcgtccccaagaag
aagaccaaggtggtccgcgagctgaaggatctgctcaaggacgccgaccacctcctcctc
gcgaccgacgaagaccgcgaaggcgagtcgatctcctggcacctgctggagctcctcaag
cccaaggtccccttcgagcgcctggtcttccacgagatcaccaaggacgccatccaccgc
gccctggagaacccccgctccctcgacgatcgcctcgtgcgcgcccaggagacccggcgg
atcctggatcgcctggtgggctacggcctctccccgctcctctggtcgaagatcgccttc
ggcctctccgccggccgcgtgcagtcggtggcggtgcacgtgatcgtgcagcgcgagcgc
gagcgcatggcgttccgcaaggcgagcttctgggatctcctcgccacggtctcaaaggga
gagcgcttcgacgcccgcctcacccacgtgggggccaaccgggtcgccaccggcaaggac
ttcgacgagagcaccggcgcgctgaagaaggcggagggtctggtccacctcgacgaggcc
aaggcccacgagctgcgcaggcgcctcgagccgctgcccttcgtagtgaagtcggtcgag
gagaagcccgtcacccgcaggcctcccccgccgctgatcacctccaccatgcagcaggag
gcgaaccgcaagctggggatgagcgcccaggagacgatgcgcgtggcgcagtcgctctac
gagcgcggcctcatcacctacatgcgtaccgactcggtgcacctctcgaacgaggcgatc
cacgcggcccggggctgcgtcgagagccgcttcggcgccgagtacctcgcccccggcgtg
cgccagtacaagaccagcaccaagggcgcccaggaggcccacgaggccatccgtccgtcg
acgcacttcacgcccccgaaggagacgggcctcgttggccgcgattacgacctctacgag
ctgatctggatgcgcaccgtcgccacccagatggccgacgcgcgccagacccagatcgcc
gtgaagatcgaggccggcgattcgaccttcgccgccagcgggctgcggatcgtcttcccc
ggcttcctccgcgcgtacgtggagggctccgacgacgcccaggcggcgctggaggagcgg
gagcgcctcctccccgccctcaaggctggcgacaccctccggctcgacaagctcgaggcc
gagggccacgagaccaagccgccgccccgctacaccgaagcctcgctgatccagctcatg
gagaaggagggcatcggcaggccttcgaccttcgccaccatcgtcgcgacgatcatcgac
cgcggctacgtggtgaagcaggcgaaccagctcgtccccacgttcaccgccttcgtggtc
tccgacctcctcgagaaccacttccccgatctcgtggacctcggcttcaccagccagatg
gagcagtccctcgacgcgatcgcagaggggcagctcgagtcacagccctacctgcgccag
ttctacatgggcgaccgcgggctgaagacgcgcatcgacgagcaggcgtcggagatcgat
cccaaggacgccaagctggtgaagctccccaccgagctgccgggcgtagagatccacgtc
ggcaaattcggcccctacctcgagctccaggccggggaggccgaggcccgcaaggcgtcg
atccccgacgacgtggcgccgggcgacctcacctccgaccgcgttcaggacatcctcgag
aagtacgagaggcgcgagcagggaatcggtcaggatcccgataccggcaagcccgtctac
ctgaagaccggcagctacggcccctacgtgcagctcggcgacgccgcggacgaggagaag
cccaagcgggccagcctaccgcccggcgtccagctccaggacgtcgacctcggcctcgcg
ctgaagatcctcgagctcccgcggctcctcggcacccaccccgccgacggcaaggaggtc
cgcgccggcctcggccgcttcgggccctacgtcgtccacgacggcgacttccgctcgctc
aagaaggacgacgacgtcctcagggtggatctggcccgcgccctcgagctcctctccgtg
cccaaggggcgcggcaggggccaggcggagccgctgcgccaggtgggcgcccaccctgcc
gacggccagccgatccagctctactcgggccgctatggcttctacgtgaagcacggcgac
accaccgccaccgtgagcaaggacgcctccttcgacccgcaggcgctcaccgtggagcag
gcggtggaggccctcgccgccgcgccagcgggcaagaagaagcgccccgccgcgcgcaag
gccgcctccggcgccaaggccgctgcctccaaggagaaggccccggcgaagaagtccgcc
gcgcccaagaagaaggccgaggcatcgagcgacgctcccaaggcggcgaggacgaccaag
tccgcgccctcgagcggcaactccgccgctcccaagaaggtcgccgcccggaagaccacc
aagccgtag
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