Vulgatibacter incomptus: AKJ08_3624
Help
Entry
AKJ08_3624 CDS
T04035
Name
(GenBank) RNA polymerase associated protein RapA
KO
K03580
ATP-dependent helicase HepA [EC:5.6.2.-]
Organism
vin
Vulgatibacter incomptus
Brite
KEGG Orthology (KO) [BR:
vin00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
vin03021
]
AKJ08_3624
Transcription machinery [BR:
vin03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
RNA polymerase-associated proteins
AKJ08_3624
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Helicase_C
SNF2-rel_dom
RapA_C
ResIII
DEAD
AAA_19
Cas3-like_C_2
Motif
Other DBs
NCBI-ProteinID:
AKU93237
UniProt:
A0A0K1PIA8
LinkDB
All DBs
Position
4222933..4225536
Genome browser
AA seq
867 aa
AA seq
DB search
MPKPHQLAVVQRVLSARSPRFVLADEVGLGKTIEAGMVYAAMAQTGLAKRVLIVTPAHLS
VQWLAEMYHKFHSMFTLLDGERLAKEAEEDPRPAWWRFPKVVTSLELLARSEEHREAIGD
PAGRWDLVIFDEAHHLTSPKAYEAAEAAADNTHGLLLLTATPLQLDPLEHFKLLSLVDPA
TPESFEEFEARLERQGDLSERLRELLKAKEPKAAARAAKAITKILPEDDALIEGASAIAD
GEEGASERFVSHLAEAYSISSRLIRNRRAMVGGLAPRRLVRHDVKLSADELAFRTAVNEK
LAAGELKASGAALASLLKRLDSSPRAAAAALTAQKLPELAEQAKGLEGPSRDAKAKALLD
LVKKVRKDEAGAKLLVFAEARETMEYVRDVLARGGIAAGVYHGDLPQLERDRQVARFRDP
EGPPVLVSTEVGGEGRNFQFCHHLVNFDLAWSPAAIEQRIGRLDRIGQNHEVRIHCFRVE
GTVGAKVFDLMADAVRVFDETVGGLDPVLERVESEVARQVATAKDLDEYQAKLAKRVAQA
REEVRRAYDPLLDARSFDKDSVRKLVDRASARLGLDSLDGEELEESLWRVARELDERLEE
TVIDLARKVGIHADCEEHVDAFQCSFKIGSELAVDALPGFELEEDQAVLGSFWRDTAVVE
EENDYFATGHPLVEALFAWIRDGEEGRASWLLSDAMRPATFGFAFTFLPAFPEAEDLAAG
SKVPSRQAARYLHKQRFPVAVELARGSDRPRVRDELLEALEDPDGAPAPRGSSGNVLSAA
VSAAFAAAKEEAEARLAVEKAAAIARLEADRDAAIGRLELAARRADDLELHALRAEARRI
SESLDTARRALEAIRLDLDQAAGLLPR
NT seq
2604 nt
NT seq
+upstream
nt +downstream
nt
atgccgaagccccaccagctcgcggtggtccagcgggtgctctcggctcgttcgccccgg
ttcgtcctcgcggacgaggtgggtctgggcaagacgatcgaggccggcatggtctacgcg
gccatggcgcagacgggcctcgccaagcgcgtgctcatcgtcacgccggcccatctctcg
gtgcagtggctcgccgagatgtatcacaagtttcactccatgtttacgctcctggacggc
gagcgcctcgcgaaggaggccgaggaggatccccgtccggcgtggtggcggttcccgaag
gtggtcacctccctcgagctcctcgcccggagcgaagagcaccgcgaggcgatcggcgat
cccgctgggcgctgggatctcgtgatcttcgacgaggcccaccacctcacctcgcccaag
gcgtacgaggccgcggaggcggcggcggacaacacccacggcctgctcctgctcacggcg
acgccgctccagctcgaccccctcgagcacttcaagctgctctccctcgtggatccggcg
acgccggagagcttcgaggagttcgaggcgcggctcgagcgtcagggtgatctatccgag
aggctgcgcgagctgctgaaggcgaaggagccgaaggcggcggcccgggcggccaaggcg
atcacgaagatcctcccggaggacgacgccctcatcgaaggggcgagcgcgatcgccgac
ggcgaggaaggggcgtcggagcgcttcgtctcccacctcgccgaggcatattcgatctcg
tcgcggctgatccgcaaccggcgcgcgatggtgggcggcctcgcgccccgccgcctggtg
cggcacgacgtgaagctctctgccgacgagctcgccttccgcacggcggtgaacgaaaag
ctggccgccggcgagctgaaggcctccggcgccgcgctcgcgtcgctcctcaagcgcctc
gactcctcgcctcgggccgcagccgccgcgctgaccgcccagaagctgccggagctggcg
gagcaggcgaagggcctcgaggggccgtcccgggacgccaaggcgaaggcgctgctcgac
ctggtgaagaaggtccgcaaggacgaggccggagccaagctcctcgtcttcgcggaggcg
cgggagacgatggagtacgtgcgcgacgtcctcgcccgcggcgggatcgcggccggcgtc
taccacggcgatctcccgcagctcgagcgcgaccggcaggtggcgcgcttccgggatccc
gagggaccgcccgtgctcgtctccaccgaggtgggcggcgagggccgcaacttccagttc
tgccaccacctggtgaacttcgacctcgcgtggagccccgcggcgatcgagcagcggatc
ggccgcctcgatcgaatcggccagaaccacgaggtgcggatccactgtttccgagtcgaa
ggcaccgtgggtgcgaaggtcttcgacctaatggcggacgcggtgcgggtcttcgacgag
accgtcggcggcctggatccggtgctcgagagggtggagtccgaggtggcccgccaggtg
gcgacggcgaaggacctcgacgagtaccaggcgaagctcgcgaagcgggtggcgcaggcg
cgcgaagaggtgcgccgcgcgtacgacccgctcctcgacgcccgctccttcgacaaggac
tcggtgcggaagctggtggatcgcgcctcggcgcgcctcggcctcgactccctcgacggc
gaggagctcgaggagtcgctgtggcgcgtggcccgagagctcgacgagcgcctcgaggag
acggtgatcgatctcgcccgcaaggtcgggatccacgccgactgcgaggagcacgtcgac
gccttccagtgcagcttcaagatcggcagcgagctcgcggtggacgcgctcccgggcttc
gagctcgaggaggaccaggcggtcctcggcagcttctggcgcgacacggcggtggtcgag
gaggagaacgactacttcgccacggggcatccgctggtggaggcgctcttcgcctggatc
cgcgacggcgaggaggggcgcgcttcctggctgctttcggacgcgatgcggccggccacc
ttcggatttgcgttcaccttcctgccggccttccccgaggccgaggatctcgcggcgggc
tcgaaggtcccgtcgcgccaggccgcgcgctacctccacaagcagcgcttcccggtggcg
gtggagctggcccgcggcagcgacaggccgagggtgcgggacgagctcctcgaggcgctg
gaggatccggacggcgcgccggcgccgcggggctcgagcggaaacgtcctgtcggcggcg
gtgtcggcggccttcgccgcggcgaaggaggaggccgaggcgaggctcgcggtcgagaag
gcggcggccatcgcgcgcctcgaggcggatcgcgacgcggccatcggcaggctcgagctc
gcggctcgccgtgcggacgatctggagctccacgcgctacgggcggaggcacggcggatc
tccgagtcgctggacacggcgcggagggccctcgaggcgatccgcctcgacctcgaccag
gcggcggggctcctgccccgctga
DBGET
integrated database retrieval system
