KEGG   Vibrio sp. NTOU-M3: AB2S62_00155
Entry
AB2S62_00155      CDS       T10494                                 
Symbol
gspD
Name
(GenBank) type II secretion system secretin GspD
  KO
K02453  general secretion pathway protein D
Organism
vio  Vibrio sp. NTOU-M3
Pathway
vio03070  Bacterial secretion system
vio05111  Biofilm formation - Vibrio cholerae
Brite
KEGG Orthology (KO) [BR:vio00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    AB2S62_00155 (gspD)
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   05111 Biofilm formation - Vibrio cholerae
    AB2S62_00155 (gspD)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:vio02044]
    AB2S62_00155 (gspD)
Secretion system [BR:vio02044]
 Type II secretion system
  General secretion pathway protein
   AB2S62_00155 (gspD)
SSDB
Motif
Pfam: Secretin Secretin_N type_II_gspD_N0 OST48_N
Other DBs
NCBI-ProteinID: XDE86564
LinkDB
Position
I:81977..84013
AA seq 678 aa
MKGWLNKSTWLLAGSLLASPMVMANDYSASFKGTDIQEFINIVGRNLEKTIIVDPSVRGK
IDVRSYDMLTEDQYYSFFLNVLEVYGFAVVEMDNGILKVIKSKDAKTSAIPVVGDASAKG
DSVVTRVVAVRNVSVRELSPLLRQLNDNAGAGNVVHYDPANIILITGRAAVVNRLADIIK
RVDQAGDKEIEVVELDNASAAEMVRIVEALNKTTEQKNTPAFLQPKLVADDRTNSILISG
DPQVRQRLRKLIQQLDIEMATKGNNQVVYLKNAKAEDLVEVLKGVSDNLQAEKNGGGKKG
GGAANRGEVMISAHPETNALVLTAPPDIMNALQDVIAQLDIRRAQVLIEALIVEMAEGDG
INLGVQWGALESGAVIQHGNAGAPIGQIMVGLEEAKDKVEKKPIRDSDTGAIKYYEETTT
KGDFSTLAAALRGVNGSALSIIMGDWTALVTAVSTDSNSNILSSPSITVMDNGEASFIVG
EEVPVITGSTAGSNNDNPFQTVDRKEVGIKLKVTPQINEGNSVRLDIEQEVSSVLPTTST
RTVDVSFAKRQLNTSVMVEDGQMIVLGGLIDEKTEESESKVPLLGDIPILGYLFKSTSSK
ASKRNLMVFIKPTIIRDGLTADGITQRKYNFIRAEQLYKAEEGLKLMDDAHIPVLPKFGE
DRRHPVEIQAFIEQMESK
NT seq 2037 nt   +upstreamnt  +downstreamnt
gtgaagggttggctgaacaagagtacatggttgttggctggaagtttactcgcgtcacca
atggtgatggcgaatgattatagtgccagttttaaaggtacagacattcaggaattcatc
aacattgttggacgcaacttagagaagacgattatcgtggacccttctgttcgcggtaaa
attgatgtgcgcagttacgatatgttaacggaagatcagtactacagcttcttcttgaac
gtattggaagtttatggttttgctgtcgttgaaatggataacgggattttgaaagttatc
aaatcgaaagacgcaaaaacgtctgcgatccctgttgtgggtgatgccagtgccaaaggc
gatagtgttgtgactcgagttgtggctgttcgcaatgtttcagtgcgtgagttatctcct
ttgcttcgtcagttaaatgataatgctggcgctggtaacgtggtgcactacgaccctgct
aacatcattctgatcacgggtcgtgcggcggttgttaatcgcctagccgatattatcaaa
cgtgtcgaccaagccggcgataaagaaattgaagtggtggaattggataacgcttctgct
gctgaaatggtacgtattgttgaagcattgaataaaaccacagaacaaaaaaataccccc
gcatttttgcaaccaaaattggtcgcagacgatcgtaccaactctattcttatttctggt
gatccgcaggtgcgccagcgtctacgtaaattgattcagcaactagatatcgaaatggcg
actaaaggtaataaccaagtggtttacctgaaaaatgctaaagctgaagatctggttgaa
gtgcttaaaggtgtgtcagataacctgcaggcagagaaaaatggtggtggtaaaaaaggc
ggaggagctgcgaatcgcggtgaagtgatgatttctgctcacccagaaaccaatgctttg
gtactgactgcaccgcccgacatcatgaatgcactgcaagacgtgattgctcagcttgat
attcgccgtgctcaggtattgattgaagcgttgattgttgaaatggcggaaggtgatggc
attaaccttggagttcaatggggagctcttgaaagcggtgcggttattcaacatggtaat
gctggtgctcctatcggccagattatggttggtttggaagaagcaaaagataaagttgaa
aaaaaaccaattcgcgatagtgacacaggtgctattaaatactacgaagaaactacaact
aaaggtgatttttctacgttggcagcggcacttcgcggtgttaatggttctgcgcttagt
attataatgggcgattggacagcattggtcactgctgtatcaaccgattctaactctaat
attctgtcgtctccgagtatcacagtgatggataacggagaggcctcctttattgtcggt
gaggaagtgcctgtgatcacaggttctacagcaggttctaataatgacaatccatttcag
acagttgatcgtaaagaggtcgggatcaagctgaaggttaccccgcaaattaatgaagga
aactctgtgcgattagatatcgaacaagaggtttcaagtgtattaccaacaacgagcaca
agaaccgttgatgttagttttgctaaacgccagctcaatacgtctgtgatggttgaagat
ggtcagatgattgttctaggtggccttatcgatgaaaaaacagaagaaagtgaatcgaaa
gtaccattactaggtgatatcccaatactgggctacttattcaagtcgaccagttcaaaa
gcatccaagagaaatttaatggtatttattaagccgacaattattcgtgatggtttgact
gcggatggtatcactcagcgtaaatacaactttattcgagcagaacaactgtataaagct
gaagaaggcctgaagctgatggatgatgctcacattcctgtattacccaaatttggtgaa
gatcgacgtcatccagtagaaatccaagcatttattgagcaaatggaaagcaagtaa

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