Vibrio sp. NTOU-M3: AB2S62_00690
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Entry
AB2S62_00690 CDS
T10494
Symbol
mutM
Name
(GenBank) bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
vio Vibrio sp. NTOU-M3
Pathway
vio03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
vio00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
AB2S62_00690 (mutM)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
vio03400
]
AB2S62_00690 (mutM)
Enzymes [BR:
vio01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
AB2S62_00690 (mutM)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
AB2S62_00690 (mutM)
DNA repair and recombination proteins [BR:
vio03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
AB2S62_00690 (mutM)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
Zn_ribbon_IS1595
Zn_ribbon_6
NFACT_N
Lar_restr_allev
Motif
Other DBs
NCBI-ProteinID:
XDE86660
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All DBs
Position
I:185046..185855
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AA seq
269 aa
AA seq
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MPELPEVEVSKMGITPHLVGQTIQSLTFRTPKLRWDIPLELKQLEGEVIRNITRRAKYLL
IETDIGSAIVHLGMSGSLRVLDAEICAGKHDHVDLKLSNGKVLRYNDPRRFGAWLWCAPN
EQHQVLSNLGPEPLTAEFHAGYMLEKASGKRSTVKQFIMDNKFVVGVGNIYACESLFSAK
IHPKRSAGSLSSGEWQALVSEIKQVLHTAISQGGTTLKDFSQADGKPGYFAQELNVYGKA
GEPCPHCAERVEAMKIGQRNTFFCSNCQK
NT seq
810 nt
NT seq
+upstream
nt +downstream
nt
atgcctgagttaccagaagttgaagttagtaaaatggggatcacccctcatttagtgggt
caaacgatccagtctttgacttttcgcacccctaaactccgttgggatattccactggaa
ttaaaacaattagaaggcgaggttatccgaaatattactcgccgagctaaatatttactg
attgagaccgatataggtagtgcgattgttcatttaggaatgtcggggtcgttgcgagtg
cttgatgctgaaatctgtgcaggcaaacatgatcatgttgatttgaagctaagtaatgga
aaagtactgagatacaatgatccccgccgatttggtgcttggttatggtgcgcgccgaat
gaacaacatcaagtattaagcaaccttggccctgaaccattaacagcggaatttcatgct
ggctatatgctagagaaagcatcaggtaagcgttcgacggttaagcagtttattatggat
aataagtttgttgttggtgttggcaatatctatgcgtgtgagtctttattttctgccaaa
atccatcctaaaaggtctgctgggagtttatcttccggagaatggcaagctttggtgtca
gagatcaagcaagtgttgcacaccgccattagtcaaggtggcacgacactaaaagatttt
tctcaggcagatggtaaacctggatattttgctcaagagttaaatgtgtatggtaaggcg
ggagagccatgtcctcattgtgctgagagagttgaagccatgaaaatagggcaacgcaac
acgtttttttgttcaaattgccaaaagtga
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