Vibrio sp. NTOU-M3: AB2S62_01745
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Entry
AB2S62_01745 CDS
T10494
Symbol
csrD
Name
(GenBank) RNase E specificity factor CsrD
KO
K18765
RNase E specificity factor CsrD
Organism
vio Vibrio sp. NTOU-M3
Brite
Messenger RNA biogenesis [BR:
vio03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
AB2S62_01745 (csrD)
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NCBI-ProteinID:
XDE86854
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Position
I:407762..409771
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AA seq
669 aa
AA seq
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MRYTPTLKLSTRLVAFVTMIVISAMFILFLGGTLSFKQLGQEYLDHSLIGIVEVVDKEME
DPDAAYSMQRWMPKMLQASNIVEMELSSSVGVIYRFKDTSSKYDPMLLYEVSFELQRNQG
YSIAFKAIPPYIGYGYSMQALLSITLSVLLIIFCLMQGVKWLKKQLYGSELLEERGRMIL
AGRVEEYAKGDINEWPYTASEALDRVIEELQDARQERSRFDTFIRTQTFLDQLTGAANRV
LFDSKLESAVTESGANGGVLLLRIDDWDVLKEESGKQIANDFIVEVGEGLSNIIQRYPDV
ILSRYYDSDFAIFAPHLNSKDVSNIAINCLKQIAKLTPPDPLEPDNWCHIGITMYREGER
QGRIMDEAETALKSAQLQRVNTWNRFKKVVAQDEERGSVRWRTLFDQVLKPEKLFVFEQP
CYLLDSQQELQIDHHELFVRIDDPEKGLIKSSHFNAAIESVGYEMTLDKASFSLIINFLK
SSSTHSLNYSVNLYVTPFADREYRKWFRDELLQLPIDKRGLLTLEFAEARLVKHLDYMRP
IIKMASGLGCKIIVGQAGRSIVSTHYLKDLPIHYLKLHRSLIKQIDQRHENQLFVRSLLG
ACRGLKTQLIAVGVETKNEFNTVIKLGVNGVQGRFFKKEEQLLPIEKQTAMNDFTTKVKV
GRRNRWRKK
NT seq
2010 nt
NT seq
+upstream
nt +downstream
nt
gtgaggtatacgcctaccttaaagctgagtactcgattggttgcatttgtaacgatgatc
gtgatcagcgccatgttcatcttgtttctcggtgggactttgtcttttaaacagcttggg
caagaatatctcgatcactctttgatcggtattgtcgaggtcgtggacaaagaaatggaa
gatcctgatgcggcatattcaatgcagcggtggatgcctaagatgttgcaagcatcaaac
attgttgaaatggaattgtcttcctccgttggagtgatctatcgcttcaaagatacctct
tcaaaatacgatccaatgctcctttatgaagtcagctttgagttacaaagaaatcaaggt
tatagcatcgcgtttaaagccatccctccttacattggctacggttattcgatgcaagct
cttctgtcgatcacgctttcggtgttactgatcatcttttgcttaatgcaaggcgtaaag
tggcttaaaaaacaattgtatggctcggagttactggaagagcgagggcgaatgatctta
gcgggccgagtggaagaatatgccaaaggagacatcaacgaatggccttatacagcgagt
gaagccttagaccgcgttattgaagagttgcaagatgctcggcaggagcgcagtcggttt
gatacttttatccgaacacaaacattccttgatcaactgacaggtgccgccaaccgagta
ttgtttgatagtaagttggaatcagcagtgacggaaagtggggcaaatggtggcgttcta
ttgttacggattgatgactgggatgtactgaaagaagaaagcggcaagcaaattgccaat
gactttatcgttgaagtaggtgaagggctttcgaacattattcaacgttatcctgacgtt
attctctctcgatattatgattctgacttcgccatttttgcgccacacttaaatagcaaa
gacgtgtcaaatatagccattaactgcttaaagcaaatcgcgaaacttacccctccagat
ccattagagcccgataattggtgccatattggcattactatgtatcgtgaaggtgagcgg
caaggtcgtatcatggatgaagcggagaccgcattaaaaagtgcacagctacaacgggta
aatacatggaaccgtttcaagaaagtggtcgctcaagatgaagagcgaggtagtgtccgt
tggagaacactttttgatcaggtgttgaaacccgaaaagttgtttgtttttgagcagcct
tgctacttacttgatagtcagcaagaactgcaaatagatcatcatgagctatttgtgcgg
attgatgatccagaaaaaggattgattaaatcctctcatttcaatgcggctattgaatca
gttggttatgaaatgaccttagataaggcaagtttctctttgattatcaactttttgaag
tcatcctctacgcattctctaaactattctgttaatctttatgtcactccttttgctgat
cgtgaatatcgaaaatggtttagggatgagttacttcagttacccattgataaacgtggt
ttgctaacgttggaatttgctgaagcgagattggtgaaacacctcgattatatgcgaccc
attattaagatggcatcaggcttagggtgcaagatcatagtcggtcaggctgggcgctca
atagtgagtacgcattatctaaaagatctgccaatccattatttaaaactccaccggagt
ctgattaaacaaattgatcagaggcatgaaaaccaactttttgtgcgtagtttgcttggc
gcatgtagagggcttaaaactcaactcattgctgtcggtgttgaaacgaaaaatgaattc
aacacggtgattaagctaggggtgaatggtgttcaaggacgcttctttaaaaaagaagaa
caattgcttccaattgaaaaacagaccgctatgaatgattttacgactaaagtaaaagta
gggcggcgaaaccggtggcggaaaaaataa
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