Vibrio sp. NTOU-M3: AB2S62_02425
Help
Entry
AB2S62_02425 CDS
T10494
Symbol
rnc
Name
(GenBank) ribonuclease III
KO
K03685
ribonuclease III [EC:
3.1.26.3
]
Organism
vio Vibrio sp. NTOU-M3
Pathway
vio03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
vio00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
AB2S62_02425 (rnc)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
vio03019
]
AB2S62_02425 (rnc)
03009 Ribosome biogenesis [BR:
vio03009
]
AB2S62_02425 (rnc)
03036 Chromosome and associated proteins [BR:
vio03036
]
AB2S62_02425 (rnc)
Enzymes [BR:
vio01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.3 ribonuclease III
AB2S62_02425 (rnc)
Messenger RNA biogenesis [BR:
vio03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
AB2S62_02425 (rnc)
Ribosome biogenesis [BR:
vio03009
]
Eukaryotic type
90S particles
RNase
AB2S62_02425 (rnc)
Prokaryotic type
rRNA processing factors
AB2S62_02425 (rnc)
Chromosome and associated proteins [BR:
vio03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Microprocessor complex
AB2S62_02425 (rnc)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ribonucleas_3_3
Ribonuclease_3
dsrm
DND1_DSRM
DSRM_2
RM44_endonuclase
Motif
Other DBs
NCBI-ProteinID:
XDE86969
LinkDB
All DBs
Position
I:549939..550616
Genome browser
AA seq
225 aa
AA seq
DB search
MNSPISKLEKKLGYQFADAELINLALTHRSANGKHNERLEFLGDSILSFVIADDLYHRFP
KVNEGDMSRMRATLVRGNTLAELGREFELGDHLKLGPGELKSGGFRRDSILADAVEAIIG
AIYLDSDIEVVRGIILNWYKTRLEAIKPGVSQKDPKTRLQEFLQGRRKPLPVYTVTNIKG
EAHNQEFTVSCEVAGIGQPVIGKGTSRRKAEQAAAETALEQLTNG
NT seq
678 nt
NT seq
+upstream
nt +downstream
nt
atgaattctccaatatcgaaactagaaaaaaagcttggctaccaatttgctgatgctgag
cttatcaatttggcactgactcaccgcagtgcgaatggaaaacataatgaacgtcttgag
tttctgggcgattcaattttaagttttgtcattgctgacgatctttatcatcgtttcccg
aaagtcaatgagggtgacatgagccgtatgcgcgcgactttggttcgcggcaatacattg
gcagagcttggacgagagtttgagctaggagatcacttaaaattaggtccaggtgagttg
aaaagtggcggtttccgccgtgattccattctggctgatgctgtggaagcgatcattggt
gctatctatcttgatagcgacattgaagtggttcgcggcattatccttaactggtacaaa
actcgcctagaggctatcaagccaggcgtgtcacaaaaagatccaaagactcgtttgcaa
gaattcttgcaaggacgtcgtaagccattaccggtctatactgtgactaatattaaaggt
gaagcacacaatcaggaatttactgtatcgtgtgaggttgcaggtattggacagcctgtt
ataggtaaaggcaccagccgccgcaaggcagagcaagcggctgctgaaacggcactagag
cagttaacaaatggctga
DBGET
integrated database retrieval system