Vibrio sp. NTOU-M3: AB2S62_04500
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Entry
AB2S62_04500 CDS
T10494
Name
(GenBank) HU family DNA-binding protein
KO
K03530
DNA-binding protein HU-beta
Organism
vio Vibrio sp. NTOU-M3
Brite
KEGG Orthology (KO) [BR:
vio00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
vio03032
]
AB2S62_04500
03036 Chromosome and associated proteins [BR:
vio03036
]
AB2S62_04500
03400 DNA repair and recombination proteins [BR:
vio03400
]
AB2S62_04500
DNA replication proteins [BR:
vio03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
AB2S62_04500
Chromosome and associated proteins [BR:
vio03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
AB2S62_04500
DNA repair and recombination proteins [BR:
vio03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
AB2S62_04500
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_euk_2
HU-CCDC81_bac_2
ACP_syn_III_C
NA37
HU-CCDC81_euk_1
DUF2267
Motif
Other DBs
NCBI-ProteinID:
XDE87340
LinkDB
All DBs
Position
I:989300..989572
Genome browser
AA seq
90 aa
AA seq
DB search
MNKTQLVEKIAENADLSKASAGRALDAVIEAVSDTLKSGDQVALVGFGTFSVRTRAARTG
RNPKTGEEIQIAEAKVPSFKAGKALKDACN
NT seq
273 nt
NT seq
+upstream
nt +downstream
nt
gtgaataaaacacaattagtagaaaaaattgcagagaatgcagatctttctaaagcatca
gcaggtcgtgctttagacgcagtaattgaagccgtaagcgatacgcttaagtctggtgat
caagttgctcttgttggctttggtactttcagtgtacgtacacgtgctgcgcgtactggt
cgtaatccaaaaacaggtgaagaaattcagatcgctgaagctaaagtaccatctttcaaa
gctggtaaagcactaaaagacgcttgtaactaa
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