Vibrio sp. NTOU-M3: AB2S62_04525
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Entry
AB2S62_04525 CDS
T10494
Symbol
ihfB
Name
(GenBank) integration host factor subunit beta
KO
K05788
integration host factor subunit beta
Organism
vio Vibrio sp. NTOU-M3
Brite
KEGG Orthology (KO) [BR:
vio00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
vio03032
]
AB2S62_04525 (ihfB)
03036 Chromosome and associated proteins [BR:
vio03036
]
AB2S62_04525 (ihfB)
03400 DNA repair and recombination proteins [BR:
vio03400
]
AB2S62_04525 (ihfB)
DNA replication proteins [BR:
vio03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
AB2S62_04525 (ihfB)
Chromosome and associated proteins [BR:
vio03036
]
Prokaryotic type
Nucleoid associated proteins
IHF (integration host factor)
AB2S62_04525 (ihfB)
DNA repair and recombination proteins [BR:
vio03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Facilitator
AB2S62_04525 (ihfB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
HU-CCDC81_euk_2
Glycos_trans_3N
HU-CCDC81_euk_1
HU-DNA_bdg
DUF4777
HAAS
Motif
Other DBs
NCBI-ProteinID:
XDE87345
LinkDB
All DBs
Position
I:994860..995141
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AA seq
93 aa
AA seq
DB search
MTKSELIERLCAEQTHLSAKEIEDAVKDILEHMATTLERGDRIEIRGFGSFSLHYREPRV
GRNPKTGDKVELEGKFVPHFKPGKELRERVNLG
NT seq
282 nt
NT seq
+upstream
nt +downstream
nt
atgactaagtctgaattaatagaaagactctgtgctgaacaaactcacctttcagcgaaa
gagatcgaagacgcagtgaaagatatcctagaacatatggcgacgactctagagcgtggt
gacagaatcgaaatccgaggttttggtagtttctctctgcattatcgtgagccacgtgtt
gggcgcaatccaaaaactggtgataaagtggagcttgaaggaaaatttgttcctcacttt
aagccaggaaaagagctgagagagcgcgttaatctaggctaa
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integrated database retrieval system
