Vibrio sp. NTOU-M3: AB2S62_06825
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Entry
AB2S62_06825 CDS
T10494
Symbol
fdhF
Name
(GenBank) formate dehydrogenase subunit alpha
KO
K00123
formate dehydrogenase major subunit [EC:
1.17.1.9
]
Organism
vio Vibrio sp. NTOU-M3
Pathway
vio00630
Glyoxylate and dicarboxylate metabolism
vio00680
Methane metabolism
vio01100
Metabolic pathways
vio01120
Microbial metabolism in diverse environments
vio01200
Carbon metabolism
Brite
KEGG Orthology (KO) [BR:
vio00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
AB2S62_06825 (fdhF)
09102 Energy metabolism
00680 Methane metabolism
AB2S62_06825 (fdhF)
Enzymes [BR:
vio01000
]
1. Oxidoreductases
1.17 Acting on CH or CH2 groups
1.17.1 With NAD+ or NADP+ as acceptor
1.17.1.9 formate dehydrogenase
AB2S62_06825 (fdhF)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Molybdopterin
Molydop_binding
Pyr_redox_2
Fer4_20
Molybdop_Fe4S4
Pyr_redox
Pyr_redox_3
Fer2_4
Fer4_7
NAD_binding_8
Fer4
Fer4_9
DAO
Fer4_6
Fer4_8
Fer4_2
NAD_binding_7
Thi4
FAD_oxidored
Fer4_21
Fer4_10
Fer4_16
FAD_binding_2
HI0933_like
Fer4_18
Amino_oxidase
FAD_binding_3
Fer4_3
2-Hacid_dh_C
Fer4_15
Fer4_22
Fer4_17
Motif
Other DBs
NCBI-ProteinID:
XDE87779
LinkDB
All DBs
Position
I:1510931..1515127
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AA seq
1398 aa
AA seq
DB search
MVQIVIDGKYRIIEEGQTLLEAAKVCGVEIPSLCGLNKTADKVPCDLCVVEVESGGIQRS
CELQVYSGLSVITQSEALSERRRKALNRIMTDHYADCEAPCKTACPAGVDIQSYLYHIAQ
NDHQKAIEVIKRTLPMPLSIGRVCPAFCESECRRGLVDDSIAIRQLKRHAADADLAMQES
YIPPKKADKGKRIAVIGSGPGGLTAGYYLSNEGYNVTVFESMPEAGGWLRYGIPEYRLPK
SILDKEIELMCRNGMTVECNKKLGVDFTLSSLSEDYDAVCLAVGASKAVEMHYTGSDLEG
CYLGVDYLKDYVTEHHYVTGKKVAIIGGGNTAIDCARTAVRDGADTTLIYRRTRDEMPAE
DYEIEEAEHEGVKFHFLTNPVENIADEHGRVKEVRLERMKLGPADASGRRSPQTTGEFFT
EAFDTVIAAVSQKPDLSFMENEALEIPLTRWNTADVNPDTMHSGVGNIFSIGDFRRGPAT
AVEAVGDGRVVAGAIDRFFNGDMENIPVTPFNARKEKKLKQLDPIQFENIQKIKRKIMPE
LTPEQRAQSFAEVELGFDNEEAMAEAARCLECGCQANTACDLRDYSTEYGAEQSFNHAVE
IQSNEYWQAHRSKETRQKFEIDRSSEFIVFDANRCISCGQCVQACRDQSVHGILSFMTDK
NGRPASRPECRPNFGANGTLMGDSNCVQCGACVQVCPTGAITDARDRAQGRIEHLKAVDT
ICTYCGVGCKLTMYVDEQDNRIRYVKGADSPVNEGMLCVKGRFGFDFIGSDARLTTPLIR
KDGWLQPASWDEAIGLIAEKFTAIKQGFGGNALAGFSSAKTTNEDNYAFQKFIRRELGTN
NVDHCARLCHASTVTGLEASLGSGAMTNDIPSIKHSDVIFIIGSDTTVAHPIIGSHIKQA
VRHHGARLIVADPKRIDIADHAELYMAHRPGTDVMLLNGVMQQIIKNGWYDQDYIEERVD
GFDTLLQEVMSPNYSLEKVELVTGVKAEDIFAMARMIGTAERTAVYYSMGITQHTTGHDN
VRSIANLQLLCGNIGIEGGGINPLRGQSNVQGACDMGALPNNYPGYQKVYNPLIRQKFAM
EWDAPDLPAESGLTLTEIIDAACKRDVRGLYVMGENPVLSDPNQAHVIEGLEALDFLVVQ
DIFLTETAQYADVVLPSCSFAEKSGHFTNTERRVQRVNPAVNPPGEAREDWRIIQSIAVA
MGSDWHYKHVSEITNEIARVTPQYGGLRWENITIDGVQWPSNKNNPEGTRIMHRTQFTRG
RGQMEAIPFRYAAELPDEEYPLVLTTGRVLEQFHTGTMTRKTQGLNNLAGPRAMISVADA
EALGINNGQMLRVSTRRGEIEIAAFVTKRMQKGVIFIPFHFVESPVNRLTTTATDPHAKI
PEFKVAAVKVEPLVSEPV
NT seq
4197 nt
NT seq
+upstream
nt +downstream
nt
atggttcagatagttatagatggtaaatacagaatcatcgaagaaggccagacgttactg
gaagcggccaaggtctgtggtgttgaaataccgtcgttgtgtggactaaataaaacggcc
gataaagtgccgtgtgatttatgcgttgtcgaagtggaaagcgggggcatccaacgttcg
tgtgagctgcaagtctacagtggcttgagtgtcattacacaatcagaagccttgagtgag
cgcaggcgaaaagcgttgaatcgtatcatgactgaccactatgctgactgcgaagcgccg
tgtaaaaccgcgtgtccggctggtgtcgatattcagtcttatctttatcacattgctcaa
aacgatcatcagaaagcgatagaagtcattaagcgtaccttgccgatgccgctttctatt
ggtcgtgtttgccctgcattttgcgagtctgaatgtcggcgaggtttagtggatgactcc
atcgccattcgtcagctaaaacgtcatgccgctgatgctgatctcgcgatgcaagagagt
tatatcccaccgaaaaaagccgataaagggaagcgaatcgctgttatcggtagcggaccg
ggtggcttgacggcaggttattatctatctaacgaaggttacaatgtcacggtatttgag
tcgatgccagaagcaggtggttggctacgctacggtattcctgagtatcgtttgccgaaa
agcattcttgataaagaaattgaactgatgtgccgcaatggcatgactgttgagtgtaac
aaaaagctgggtgtcgattttacactgtctagtttgagtgaagattacgatgccgtttgt
cttgctgtcggcgcttcaaaagcggttgaaatgcactataccggtagtgatttagaaggt
tgctatcttggtgtggattacctaaaagactatgtgaccgaacatcactatgtcactggt
aagaaagtggccattattggtggtggtaacacagcaatcgactgtgccagaaccgctgtc
agagatggtgcagatacgacattgatctatcgtcgtacgcgcgatgagatgcccgctgaa
gattacgagattgaagaagcggagcacgaaggtgtgaagttccactttttgactaatcct
gtcgaaaacattgcagacgaacatggccgagtaaaagaggtacgtttagaacgcatgaag
cttggtcctgcggacgcgtctggtcgccgtagccctcagaccactggtgaattttttact
gaagcgtttgataccgtcattgccgcagtttcacaaaagcctgatctcagctttatggag
aatgaagcattggagatcccgctgactcggtggaataccgcagacgttaacccagatacc
atgcacagtggtgtcggaaacatctttagcattggtgattttcgtcgtggtccggctacc
gcagtagaagctgtcggtgatggccgtgttgtggctggtgccatcgaccgattctttaat
ggcgacatggaaaatattccagtcacacctttcaatgcgcgcaaagagaaaaagctaaag
cagcttgatcctatccaatttgaaaacattcagaaaatcaaacgcaaaattatgcctgag
cttacgccagagcaaagagcgcaaagctttgctgaggttgagcttggttttgataatgaa
gaagccatggcagaagctgcccgctgtttagagtgtggttgccaagcgaatactgcctgt
gatttgcgtgactattccacggaatacggcgctgagcaaagtttcaatcacgcagttgaa
attcagtccaacgagtattggcaagcgcatcgcagtaaagaaacacgccagaagtttgaa
attgaccgcagctcagagtttatcgtatttgacgctaaccgctgtatcagctgtgggcag
tgcgttcaggcttgtcgcgatcaatcggtgcatggcatcttaagctttatgaccgataaa
aacggtcgcccagcatctcgtcctgaatgtcggccaaacttcggtgccaatgggacctta
atgggtgactccaactgtgttcaatgtggtgcgtgtgtgcaggtttgtccaacgggtgca
attaccgatgcgcgcgacagagcgcaaggtcgtatagagcacctaaaagccgtcgatacg
atatgtacctattgtggtgtgggctgcaaactcaccatgtatgtggatgagcaagataat
cgaattcgttacgtgaaaggcgcagactcaccagttaatgaaggcatgctgtgtgtgaaa
gggcgctttggttttgactttattggcagtgatgctcgtctcaccacgccgctaattcga
aaagatggttggttgcaaccagccagttgggatgaagcgattggtttgattgcagaaaag
tttactgcaattaaacaaggtttcggcggcaatgcattagctggtttctcatcagccaaa
acgaccaatgaagacaactatgcgttccagaaatttattcgtcgtgaacttggcaccaac
aacgttgatcactgcgcacgtctatgccacgcatctacagtaacagggttagaagcgtca
ttaggcagtggagcaatgaccaatgatattccgagcatcaaacattcggatgtcattttt
atcattggctcagatacgactgtcgctcatcccatcatcggttcacacattaaacaagca
gtgcgtcatcatggtgcgcgtttgatcgttgcagaccctaaacggattgatattgcagat
catgccgagctttatatggcgcacagacccggtacggatgtgatgttgctcaacggtgta
atgcaacagatcatcaaaaatggttggtacgatcaagattatatcgaggagcgtgttgat
ggcttcgataccttgctgcaagaagtaatgtcaccgaattattcattggaaaaagttgaa
ttggtgactggcgttaaagccgaagatatttttgccatggcgcgcatgattggcaccgcc
gagcgcaccgccgtgtattactccatgggcataacccaacatacaacggggcatgacaac
gtacgttcgattgcaaatctgcaattgctgtgtggcaacattggtattgaaggtggtggt
attaacccacttcgcggtcaatccaatgtgcagggcgcgtgtgatatgggggcattgcca
aataactatccgggttatcagaaagtgtataacccacttattcgccaaaagtttgcgatg
gagtgggatgcgcctgacttgcctgccgaatcgggtctaactttaactgaaatcatcgat
gcggcgtgcaagcgtgatgttcgtggtttgtatgtgatgggtgaaaatccagtattgagt
gatcctaaccaagctcacgtcattgaaggattggaagcattagatttcttggtggtgcaa
gatatcttcctgactgaaacggcgcaatatgcggatgttgttttaccatcttgctcgttt
gcagaaaagtctggccactttactaatacagagcgccgtgttcagcgcgttaaccccgct
gtaaatccaccgggtgaggcgagagaagattggcggatcatccaatcaattgcggttgca
atgggcagtgactggcactacaaacatgtttcagaaattaccaatgaaattgcacgagtc
actccacaatatggtggcctacgttgggaaaacattacgattgatggtgtgcagtggcca
agtaataagaacaatcctgaaggaacgcgcatcatgcaccgaacccagtttactcgtggg
cgagggcagatggaggcgattccattccgttatgccgctgaacttcctgatgaggaatac
ccacttgttctaaccacgggtcgagtattggagcaattccacactggtaccatgacgcgt
aaaactcaagggttgaataaccttgctgggccaagagcaatgatcagtgtcgcagatgca
gaagcactcggcatcaataacggtcagatgctacgcgtatcaacccgacgtggggaaatt
gaaatcgctgcgtttgtgaccaagcgaatgcagaaaggggttatttttattccgttccat
tttgttgagtcaccagtcaataggttgacgacaacagcgacggatccacatgcaaaaatc
ccagaattcaaagtcgcagcagtcaaagtagagccgttagtctcggaacctgtatga
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integrated database retrieval system
