Vibrio sp. NTOU-M3: AB2S62_11200
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Entry
AB2S62_11200 CDS
T10494
Symbol
recB
Name
(GenBank) exodeoxyribonuclease V subunit beta
KO
K03582
exodeoxyribonuclease V beta subunit [EC:
3.1.11.5
]
Organism
vio Vibrio sp. NTOU-M3
Pathway
vio03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
vio00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
AB2S62_11200 (recB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
vio03400
]
AB2S62_11200 (recB)
Enzymes [BR:
vio01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
AB2S62_11200 (recB)
DNA repair and recombination proteins [BR:
vio03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
AB2S62_11200 (recB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PDDEXK_1
SLFN-g3_helicase
ResIII
AAA_25
AAA_11
TPR_Vps41
Motif
Other DBs
NCBI-ProteinID:
XDE85884
LinkDB
All DBs
Position
I:complement(2535107..2538730)
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AA seq
1207 aa
AA seq
DB search
MTLMSVVTPLDTMTFPLHGARLIEASAGTGKTFTIAGLYLRLLLGHGSEQSKHQVPLTVD
QILVVTFTEAATAELRDRIRARIHDARIAFSRGESSDPVIAPLLTEISDHKQAAEILLQA
ERQMDEAAVYTIHGFCQRMLTQNAFESGSRFNNEFVTDESHLKAQVVADYWRRNFYPLPL
NLAGEVRRLWSAPSALLHDISGYLTGSPLHLSTPAMHGSLAQLHQDNLQKIEQLKALWRE
SEDDFLSLISGSDVNKRSYTKKSLPSWLEAVTVWAASETTSYEYPDKLEKFSQQTLLEKT
PKGTAPQHPVFEAIEAFLAQPVNLKAPLLAHAITQCRTMLANAKQQKQWLSFDDLLTQLS
GAIDNDEQALLTERIRTLYPVAMIDEFQDTDPLQYSIFSRIYLDHPQSGLFMIGDPKQAI
YAFRGADIFTYIKARNQVSSHFTLGTNWRSSANMVSAVNQVFASADSPFVYDDDIPFLPV
QPSPVADKRVWIMGDQKQPALTYWLMEADDKPLAKGEYVKVMAEATASQIQTILTEAQEG
RAVFENGKKRSAIQAGDIAVLVRTGSEGRMVKEALAKQGIASVYLSNRDSVFLSVVASDL
QRLLQAVLTPENDRALRASLASELFALDAAQLDALNNDENEWENAVNEFKEYRKLWTLRG
VLPMLRAVISKRHIAERLLEETNGERTLTDLMHIGELLQQASNELDSDHGLLRWLAQSIS
DAEQGLGGSDDQIQRLESERNLVQIVTIHKSKGLEYDLVFLPFVTAYREASEAKYFDEIS
GQTVLDIDANDASLKQADKERLAEDLRLIYVALTRSVYGCFIGAAPLRNGRSTKEPTGVH
HSAMGYLLQNAQQGGISDLTMAIQKHVSQSESVVVSAPPSVQNEVFRAIEAELPELTAKE
LQQAIDRLWRVTSYSGLVKQGSHHQSYDATIEVSGFDIDSSQEEDELSLSEPERSIFTFP
KGAQPGTFLHSLFEEIEFTQPASSEENTQVILSLMENEQLDEAWLPVLQQMIGTVLETPL
DGKSLRLNEKGPSQRLVEMEFLLPIAVLSAPALNRVIQRHDPLSAKAGDLGFQTVQGMLK
GFIDLVFEHQGKYYVLDWKSNHLGDDVNFYHGEALKSAMADHRYDLQYQIYALALHRFLR
SRIADYDYQTHFGGVYYLFLRGLDGESDNGIFSAKPSEEFLQEMDRLIDGKSIETRSTTA
GQMELDL
NT seq
3624 nt
NT seq
+upstream
nt +downstream
nt
atgacattaatgtcagtagtaactccactggataccatgacgttccctttacatggggcg
cgtttaattgaagcctctgctggtactgggaagacttttaccatcgctggtttgtattta
cgtctgctgcttggtcatggcagcgagcaaagtaaacatcaagtgccattgacggtagat
caaattctggtggtaacctttactgaggcggcaaccgctgagcttcgcgatcgtattcgt
gcacgaattcatgatgcgcgcattgcgttttcacgtggagaaagttcagatccagtgata
gctccactgctgacagagataagtgatcataaacaagcggcagaaatcttactgcaagcc
gaacgacaaatggatgaggcggccgtctacaccattcatggtttctgccaacgtatgctt
acccagaatgctttcgagtctggcagtcggtttaataacgagtttgtaacggatgaaagc
cacctcaaagctcaagtcgttgctgattattggcggcgtaatttctatccgctgccatta
aatttagcgggtgaagtacgccgcttgtggagcgctccttcagccttgttgcacgacatc
agcggttatctgacaggatcgcctttgcatttatctacaccagctatgcatggcagtttg
gcgcaacttcatcaagataacttacaaaaaatcgaacaactgaaagcgctttggcgcgag
agtgaggacgattttctctcgttgatttccggctctgatgtcaataagcgcagttatacc
aaaaagtcactgccgagctggttagaagctgtgacagtctgggcagccagtgaaaccacc
agttacgagtacccagataagctagagaagttttctcagcaaacgctactggaaaaaacg
cccaaaggtactgcgccgcagcatcccgtgtttgaagctatcgaggcgtttctcgctcag
ccagtcaatttgaaagctccgttgctcgctcatgcaataacacaatgccggacgatgttg
gctaatgctaagcaacaaaaacagtggctatcttttgatgacttattgactcaactttct
ggcgcaattgataacgatgagcaagccttgctcactgaacgcattcgcacgctatatcca
gtggcgatgattgatgaattccaagataccgatccattgcagtacagcatttttagccga
atttatctcgatcacccgcagtctgggttatttatgatcggtgacccaaaacaggcgatt
tatgcattccgtggcgcggatatttttacttatatcaaagcgcgtaatcaggtcagttct
cacttcacgttaggtaccaactggcgctcgagtgctaatatggtgtcggcagtcaatcaa
gtatttgcatcagccgacagcccttttgtctacgatgatgacattccattcttaccggtt
cagcctagtcctgtcgccgataagcgcgtttggatcatgggtgaccaaaagcaaccagca
ttgacgtattggcttatggaagcggatgacaaaccgcttgcgaaaggtgagtacgtaaaa
gtgatggccgaagcaacggcaagccaaattcaaacgattttaaccgaagcgcaagaaggg
cgtgcagtcttcgaaaatggcaaaaaacgcagtgcgatccaagcgggagatattgccgtc
ttagtgcgcaccggaagcgaaggcagaatggttaaagaggcgttagcaaaacaaggtatt
gccagtgtttatctttctaaccgtgatagtgtctttctcagtgttgtggccagtgatcta
cagcgcttactgcaagcggtcttgacgccagaaaatgatcgcgcactaagagcgagtcta
gcctctgaattgtttgcacttgatgcagctcagcttgatgcgctgaataatgatgaaaat
gaatgggaaaatgccgtcaacgagttcaaagaataccgcaagctttggacactgcgtggc
gtgcttcctatgctacgggcggtgatcagtaagcgtcacattgctgagcgactgttagaa
gaaaccaatggtgagcgtactctgaccgatttgatgcacattggtgagctattacagcag
gcgagcaacgaactcgacagtgatcatggtttattgcgttggctcgctcaatcgatcagt
gatgcagagcaagggttaggcggcagcgatgatcaaattcagcgtttggagtctgaacgt
aatctggtgcagattgttactatccataaatccaaaggtttggagtacgatctggtcttt
ttgccgtttgttacggcctaccgagaagccagcgaagccaagtactttgatgagattagc
ggccagacggtattggatattgacgcaaatgacgcatcgctcaagcaagcagacaaagaa
cgattagccgaagacttacgcttgatctatgtggcattaacgcgttctgtttatggctgt
tttattggtgcagcgccactgcgaaatggtcgttcaaccaaggagccgactggcgttcac
catagtgcgatggggtacttattacaaaatgctcagcaaggcggtattagcgatttgacc
atggcaatccaaaagcatgtttcacagtctgagtctgttgtggtatctgctccgcctagt
gttcaaaatgaggtgttccgagcgattgaagctgaattaccggaactgactgccaaagaa
ctgcaacaagcgatcgaccgcttatggcgtgttaccagttattctggtttggtgaagcaa
ggcagccatcaccaatcctatgatgcaacaatagaagtcagtggttttgatatcgattcg
tcgcaagaagaagatgagctaagcctatcagagccagagcgttcgattttcacctttccg
aaaggtgctcagccgggcaccttcttgcacagtttgtttgaagagattgaatttacgcag
ccagcgagcagtgaagagaatactcaagtgattctttcgctgatggaaaacgagcagctg
gatgaagcatggctacccgttttgcagcagatgataggtaccgtgttggagaccccatta
gatggcaagtcattgcgtctgaatgaaaaagggccgtcacaacgtttggtagaaatggag
tttctgttgccgatagccgttttgtctgcaccagcattgaatcgcgttatccagcggcat
gatccactctctgctaaagcgggtgatctcggttttcagactgttcaaggcatgttaaaa
ggctttattgatttggtgtttgagcatcagggtaagtactacgtcttggactggaagtcg
aaccatttgggggatgatgtcaatttctatcatggcgaggcgctgaagtcagcgatggcc
gatcatcgctatgatctgcaataccaaatctatgcgttggccctgcaccgttttctgcgt
agccgcatcgccgattacgattaccaaactcattttggcggcgtctactacctattttta
aggggattagatggcgaaagtgacaacggcattttttcagccaagccaagtgaagagttt
ctacaagaaatggaccgattaattgatggtaagagtattgagacgcggagcacgacagca
gggcagatggaattggatttatga
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integrated database retrieval system
