Vibrio sp. NTOU-M3: AB2S62_14565
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Entry
AB2S62_14565 CDS
T10494
Symbol
fadB
Name
(GenBank) fatty acid oxidation complex subunit alpha FadB
KO
K01825
3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:
1.1.1.35
4.2.1.17
5.1.2.3
5.3.3.8
]
Organism
vio Vibrio sp. NTOU-M3
Pathway
vio00071
Fatty acid degradation
vio00280
Valine, leucine and isoleucine degradation
vio00310
Lysine degradation
vio00362
Benzoate degradation
vio00380
Tryptophan metabolism
vio00410
beta-Alanine metabolism
vio00640
Propanoate metabolism
vio00650
Butanoate metabolism
vio00907
Pinene, camphor and geraniol degradation
vio00930
Caprolactam degradation
vio01100
Metabolic pathways
vio01110
Biosynthesis of secondary metabolites
vio01120
Microbial metabolism in diverse environments
vio01200
Carbon metabolism
vio01212
Fatty acid metabolism
Module
vio_M00087
beta-Oxidation
Brite
KEGG Orthology (KO) [BR:
vio00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00640 Propanoate metabolism
AB2S62_14565 (fadB)
00650 Butanoate metabolism
AB2S62_14565 (fadB)
09103 Lipid metabolism
00071 Fatty acid degradation
AB2S62_14565 (fadB)
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
AB2S62_14565 (fadB)
00310 Lysine degradation
AB2S62_14565 (fadB)
00380 Tryptophan metabolism
AB2S62_14565 (fadB)
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
AB2S62_14565 (fadB)
09109 Metabolism of terpenoids and polyketides
00907 Pinene, camphor and geraniol degradation
AB2S62_14565 (fadB)
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
AB2S62_14565 (fadB)
00930 Caprolactam degradation
AB2S62_14565 (fadB)
Enzymes [BR:
vio01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.35 3-hydroxyacyl-CoA dehydrogenase
AB2S62_14565 (fadB)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.17 enoyl-CoA hydratase
AB2S62_14565 (fadB)
5. Isomerases
5.1 Racemases and epimerases
5.1.2 Acting on hydroxy acids and derivatives
5.1.2.3 3-hydroxybutyryl-CoA epimerase
AB2S62_14565 (fadB)
5.3 Intramolecular oxidoreductases
5.3.3 Transposing C=C bonds
5.3.3.8 Delta3-Delta2-enoyl-CoA isomerase
AB2S62_14565 (fadB)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
3HCDH_N
ECH_1
3HCDH
ECH_2
NAD_binding_2
DUF5546
DAO
Motif
Other DBs
NCBI-ProteinID:
XDE86475
LinkDB
All DBs
Position
I:3244499..3246670
Genome browser
AA seq
723 aa
AA seq
DB search
MIYQANTLQVKEVQDGIAKLSFCSPNSVNKLDLATLESLNKALDALKDHSGLKGLILTSD
KESFIVGADITEFLGLFAKTDAELDQWLQFANSIFNKLEDLPVPTISVLKGHTLGGGCEC
VLATDMRIGDKTTSIGLPETKLGIMPGFGGCVRLPRVIGADSAMEVITQGKACRADEALK
IGLLDAVVDTDTLYESALKTLTSAINEKLDWQARRRQKTSPLTLSKLESMMSFTMAKGLV
AQKAGPHYPAPMTAVITIEEGARFARNEALDIERKHFVKLAKSEEAKSLVGLFLNDQYIK
GLAKKSAKSASKDTQRAAVLGAGIMGGGIAYQSALKGVPVLMKDIAQPSLDLGMTEASKL
LNKRLSRGRIDGFKMAGILASITPSLHYAGIEESDVIVEAVVENPKVKAAVLSEVESHVS
EDTVITSNTSTIPINLLAKSLKRPENFCGMHFFNPVHRMPLVEIIRGKHTSDETINRVVA
YAAKMGKSPIVVNDCPGFFVNRVLFPYFGGFSMLLRDGADFTKIDKIMERKFGWPMGPAY
LLDVVGIDTAHHAQAVMVQGFPERMGKQGRDAIDALFEADKYGQKNGNGFYSYTIDRKGK
PKKTFSEEILPVLADVCADKQDFDEQTIIQRMMIPMINEVVLCLQEGIIATPQEADMALV
YGLGFPPFRGGVFRYLDSVGIAEFVAMAKQYSELGAMYQVPQMLIDMAAKGGNFYDAQQQ
GSI
NT seq
2172 nt
NT seq
+upstream
nt +downstream
nt
atgatttaccaagctaacaccctacaggtaaaggaagtacaagatggtatcgccaagctc
agcttctgctctcccaactcagttaacaaactggacttggccactcttgaatcactcaac
aaagcgcttgacgcactcaaagaccattcaggcctaaaagggcttattcttacttcagac
aaagaaagctttattgttggcgcagatatcaccgaattcttaggtcttttcgccaagaca
gacgctgagctcgatcagtggctgcaatttgctaacagcatctttaacaagctggaagac
ttacccgtcccgactatctcggtactaaaaggccacacgttaggtggcggttgtgagtgt
gtgcttgcaactgatatgcgaattggtgacaagaccaccagcatcggtctaccagaaaca
aaactgggcatcatgccgggctttggtggttgtgtgcgtctgccgcgtgttattggtgct
gacagcgcaatggaagtgatcactcaaggtaaagcgtgtcgtgcggatgaagcgttaaaa
attggtcttcttgatgcggttgttgataccgacacactttacgagtcagcactcaagaca
ctgacctcggcaatcaacgagaagttggactggcaagctcgtcgcaggcaaaaaacgtca
ccactgacgctaagtaagcttgaatcaatgatgagctttaccatggcgaagggtctggtg
gcacaaaaagcaggccctcactaccctgctccaatgacagccgttattactattgaagaa
ggtgctcgctttgctcgtaacgaagcactcgacattgaacgtaagcacttcgtaaaactg
gctaagtctgaagaagcaaaatcactggttggtttgttccttaatgaccaatacattaaa
gggcttgctaaaaaatcagctaagtcagcgagtaaagacacgcaacgtgcggctgtgctt
ggtgcgggcattatgggcggcggcatcgcctaccaatctgcattaaaaggcgtaccggtg
ttaatgaaagacatcgcgcaaccttcactcgatttaggcatgactgaagcatctaagctg
ctcaacaaacgcttatctcgtggtcgcattgatggctttaagatggctggtattttagcg
tctatcacaccaagcctacattacgcaggcatcgaagaatcagacgtgattgttgaggcc
gtagtagaaaacccgaaagtaaaagcagctgttctgagtgaagtcgaatcgcatgtcagt
gaagacacggttatcacctcaaacacctcaacaattcctatcaacctgttggcaaaatcg
ctgaaacgcccagaaaacttctgtggcatgcacttcttcaacccagtgcaccgcatgcct
cttgttgagatcatccgtggtaaacatacctctgatgaaaccatcaatcgcgttgttgcg
tacgctgcgaaaatgggcaaatcaccaattgtcgttaatgactgcccagggttctttgta
aaccgcgtattgttcccatactttggtggcttcagcatgctacttcgcgatggtgctgac
tttacgaaaatcgacaaaatcatggaacgtaagtttggttggccgatgggacctgcatac
ttgctcgatgttgttggtattgatacagctcaccacgcacaagccgttatggtacaaggc
ttccctgagcgtatgggcaaacaaggtcgtgacgcaatagatgcgctgttcgaagcagat
aaatacggccagaagaatggcaatggcttctacagctacaccattgatagaaaaggtaag
cctaagaaaaccttctctgaagagatcttgccggtactcgctgacgtttgtgccgataaa
caggactttgacgaacaaaccatcattcaacgtatgatgattccaatgatcaacgaagtg
gtactgtgtctacaagaaggcatcattgccactccacaagaagcggatatggcactggtt
tacggtcttggcttccctccatttcgcggtggcgtattccgctacttagatagcgtaggt
attgctgagtttgttgcaatggcaaaacaatactcagagcttggtgcaatgtaccaagta
ccacagatgctgattgatatggcggcgaaaggtggaaacttttacgatgcacaacagcaa
ggttctatctaa
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