Vibrio sp. NTOU-M3: AB2S62_15425
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Entry
AB2S62_15425 CDS
T10494
Name
(GenBank) LuxR C-terminal-related transcriptional regulator
KO
K20918
LuxR family transcriptional regulator, positive regulator of biofilm formation
Organism
vio Vibrio sp. NTOU-M3
Pathway
vio05111
Biofilm formation - Vibrio cholerae
Brite
KEGG Orthology (KO) [BR:
vio00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
05111 Biofilm formation - Vibrio cholerae
AB2S62_15425
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
vio03000
]
AB2S62_15425
Transcription factors [BR:
vio03000
]
Prokaryotic type
Helix-turn-helix
LuxR family
AB2S62_15425
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GerE
Sigma70_r4_2
VpsT-like_REC
Sigma70_r4
HTH_40
Hit1_C
HTH_24
HTH_23
HTH_VMAP-M9
HTH_38
DUF7646
HTH_Tnp_ISL3
Motif
Other DBs
NCBI-ProteinID:
XDE88796
LinkDB
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Position
II:918122..918769
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AA seq
215 aa
AA seq
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MAPTTLVILSDNNLQSNLIEQQLLCLSDVTTTAVHPDKFNHLCSRLTMDLVILDFHYLTY
LEDLDILPDFDLLNLDILVYNIPELGLNHPFVRWRTLRGMILQTACAQHLIDGVKCILQG
GMWIPRRYLEELIMLYRDPSNIRDCSFDQLTERERQVLDLVVQGSTNKEIAKLLYLSENT
VKTHIYKVYRKLNVHCRSEASKLVKQARGNSSSSN
NT seq
648 nt
NT seq
+upstream
nt +downstream
nt
atggctccaacaacgctcgtcattctgtcggacaacaatttgcaaagtaacttaatcgaa
caacagcttttatgtttaagcgatgttacgactaccgccgtgcatccagataagttcaat
cacctttgcagtcgattgacgatggacttggtgattctcgattttcattacctcacctac
cttgaggatctcgacatactgcctgattttgacctacttaatcttgatatattggtttac
aacattccagaattggggcttaaccacccttttgttcgctggcgcacattaagagggatg
atcctacaaactgcgtgcgcgcaacacttaattgatggtgtgaaatgtattttacaaggt
ggtatgtggataccacgacggtatctggaagaattgatcatgctttatcgagatccgagt
aacatacgcgattgcagctttgatcaactgaccgaaagggagcggcaagtcctcgattta
gtggttcagggaagcacaaacaaagagatcgcaaagttgctatacctatcagaaaacacc
gttaaaacacatatttacaaggtataccgcaaacttaatgtccactgtagaagtgaagcc
agcaaactggttaagcaagctcgaggaaatagcagttcgtccaattag
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