Vibrio sp. NTOU-M3: AB2S62_21595
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Entry
AB2S62_21595 CDS
T10494
Symbol
dbpA
Name
(GenBank) ATP-dependent RNA helicase DbpA
KO
K05591
ATP-dependent RNA helicase DbpA [EC:
5.6.2.6
]
Organism
vio Vibrio sp. NTOU-M3
Brite
KEGG Orthology (KO) [BR:
vio00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
vio03009
]
AB2S62_21595 (dbpA)
Enzymes [BR:
vio01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
AB2S62_21595 (dbpA)
Ribosome biogenesis [BR:
vio03009
]
Prokaryotic type
rRNA helicases
AB2S62_21595 (dbpA)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
Cas3-like_C_2
AAA_30
AAA_19
CMS1
AAA_22
Motif
Other DBs
NCBI-ProteinID:
XDE89415
LinkDB
All DBs
Position
II:697227..698603
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AA seq
458 aa
AA seq
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MTVPFNTLPLKPELLDTLKSLGYSEMTPIQQQSLPVILQGKDVIGQGKTGSGKTAAFSLG
LLSNLNVKRFRVQSLVLCPTRELADQVAKEVRTLARGIHNIKVLTLCGGMPMGPQIGSLE
HGAHILVGTPGRILDHLSKGRIQLNELNTLVLDEADRMLEMGFEEAIDAILAQAPANRQT
LLFSATFPKNIESLATKVMQKPEMIQVESTHQHTTITQNIYQLDTTEQRDDALEALLLTH
KPESSVVFCNTKKEVMNVTDELSHRGFSVVELHGDMEQREREQALTMFANKSISILVATD
VAARGLDVDNLDAVFNFELSRDPEVHVHRIGRTGRAGSKGAAFSFFGEKEAYRVERIEEY
MDVVLEPSKLPEKPIERPFYPKMQTIQILGGKKQKVRAGDILGALTKQAGIDGKRIGKIN
ILPMVSYVAVEHEVVKPALKQLQTGKMKGRNFKARVMK
NT seq
1377 nt
NT seq
+upstream
nt +downstream
nt
gtgactgttccttttaatacactgccactaaaacctgagctattagacaccctgaagtca
ttgggctatagcgaaatgacgcctattcaacaacaaagtctaccggtgattttacaaggt
aaggatgttattggtcaggggaaaacgggttcgggtaaaactgcagcgttttcattgggg
ttattatcaaaccttaatgtaaaacgattccgagtacagtctcttgttttatgtccgaca
cgtgagctcgcagatcaagttgcgaaagaagttcgtacacttgcacgcggtattcacaat
attaaagtgctgactttgtgtggcggtatgccgatggggccacaaattggttcacttgag
catggcgcacatattcttgttggaacgcctggtcgcatcctcgatcacttatccaagggt
cgtattcagctaaatgagctcaacacactagtcttggacgaagccgatcgcatgttagaa
atgggttttgaggaagcaattgacgcgattttggctcaggcgcctgccaatcgccaaaca
cttttgtttagtgcgacttttccaaaaaatatcgagtcacttgcaacgaaggtaatgcaa
aaacctgagatgattcaagttgagtcaactcatcaacacaccaccattactcagaatatt
tatcaattagatacaacagaacagcgtgatgacgcattagaagctttgttgctgactcat
aagcctgaatcttccgtcgtgttttgcaacaccaaaaaagaagtaatgaatgtgactgat
gaattgtcacatcgcggattctcagtggtcgagctgcatggtgacatggaacagcgcgag
cgcgaacaagcattgactatgtttgcaaataaaagcatttctattctggtcgcaactgat
gttgcagcgcgtggcttagatgtcgataacctagatgcagtatttaactttgagttatcg
cgtgacccagaagttcatgtccatcgcataggtcgaacaggtcgtgcggggtcaaaaggc
gcagcattcagtttctttggtgagaaagaagcttaccgtgttgaacgcatcgaagagtat
atggacgtcgtattagaaccttcgaaacttcctgaaaaaccgattgaaagacctttctac
ccgaaaatgcaaactatccaaattttaggtggtaagaagcaaaaagtgagagcgggggat
attttaggtgcactcacaaaacaagcaggcatcgatggcaagcgcattggcaaaatcaac
atacttccgatggtttcgtatgttgccgttgagcacgaagttgttaaacctgcattgaaa
cagcttcagacagggaaaatgaaagggcgtaacttcaaagcgcgagtaatgaaataa
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