KEGG   Vibrio sp. sp1: H9L11_00185
Entry
H9L11_00185       CDS       T11103                                 
Symbol
sctD
Name
(GenBank) type III secretion system inner membrane ring subunit SctD
  KO
K03220  type III secretion protein D
Organism
vip  Vibrio sp. sp1
Brite
KEGG Orthology (KO) [BR:vip00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:vip02044]
    H9L11_00185 (sctD)
Secretion system [BR:vip02044]
 Type III secretion system
  Type III secretion core apparatus
   H9L11_00185 (sctD)
SSDB
Motif
Pfam: Yop-YscD_ppl_1st Yop-YscD_ppl_2nd Yop-YscD_ppl_3rd Yop-YscD_cpl Y4YQ_C AHC1_N
Other DBs
NCBI-ProteinID: QRZ22600
LinkDB
Position
1:complement(27793..29094)
AA seq 433 aa
MQQWKIRILSGVHTGVEVTLPEGALVLGSDDFIADLVLSDAGVEANHFNLVCQQDSVILR
GCEEANINSEDIAVAGDGIELSRHAVVSVGVVKFALGYAEDALIVSNVSDESSQQNTPVV
AVQRSSWKKTTLIALLCSFVPSVIFAGMWYSQANGNNNEIVTEAEPIVLVRNILGELKLS
DVRVEWNAAARQAVLEGYVEDRTQKLDLLGRIDVLGINYKSDLRTMEEIRRGVRFILRNL
GYHQVKVENGDETGTLLLTGYIDDASRWNQVEQILERDVPGLVAWKVELQRAGAYMDTLK
ALLTDAELLKKVQLVTSGDRIEVRGELDDIETTRFYGVTRDFREQYGEKPYLVLKSIPKV
SKGTNIDFPFRSVNFGQVPYVILTDNVRYMVGARTPQGYRISSVTPAGIELVKGGRVITI
ELGYEGETNNDKS
NT seq 1302 nt   +upstreamnt  +downstreamnt
atgcagcaatggaaaattcgtattttatcaggcgtgcataccggagtagaagtcacctta
cctgaaggtgctctcgtgcttggcagtgacgactttattgctgatcttgtactgtctgat
gctggggtcgaagcgaaccatttcaacctcgtttgccagcaagactcggtcattttacga
ggctgcgaagaggcaaatattaacagtgaagacatcgctgttgcaggtgatggtatcgag
ttgtcacgccatgctgttgtctcggtcggcgttgtgaagttcgctctgggatacgcggaa
gatgcgttaattgtgagtaacgtcagcgacgaatctagccaacagaatacacctgtggtt
gctgtgcaacgctctagctggaaaaaaacaacgctcatcgctttgctttgtagttttgtc
ccgagtgtcatttttgccggtatgtggtacagccaagctaacggaaacaacaatgaaatt
gttacagaagcagaacccattgttttggtacgtaacatcttaggcgagctcaaacttagc
gacgttcgtgtggaatggaatgccgccgcacgccaagcagtcttagagggctatgttgaa
gaccgaacacagaaactcgatctgcttggtcgaattgatgtattgggcatcaattacaaa
agtgacttaagaacgatggaagaaatccgtcgcggggttcgatttattttgcgcaacctc
ggctatcaccaagtgaaagtcgaaaatggcgatgagaccggcacactgctgctgacgggc
tatatcgatgatgcaagccgctggaaccaagttgaacaaatcttggagcgagacgtgcct
ggtcttgttgcgtggaaggttgaactgcagcgagcgggtgcctacatggatacgctaaaa
gcgttattaacggatgcggagctactgaagaaagtccagttggtcaccagcggtgatcgc
atcgaagttcgtggtgagcttgatgatatcgaaacgactcgattttacggtgtgacccga
gacttccgggaacaatatggtgagaaaccgtacttagttttgaaatccatacctaaggtg
agtaaaggcactaacatcgatttcccgtttcgtagcgttaactttggccaggttccatat
gtgattctgaccgataacgttcgctatatggtcggtgcaagaacgcctcagggctaccga
atatccagtgttacacctgctggtattgagttggttaaaggcgggcgggtgataacaata
gaacttggatatgaaggcgagacgaacaatgacaaatcttga

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