Vibrio sp. sp1: H9L11_00870
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Entry
H9L11_00870 CDS
T11103
Symbol
gyrA
Name
(GenBank) DNA topoisomerase (ATP-hydrolyzing) subunit A
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
vip Vibrio sp. sp1
Brite
KEGG Orthology (KO) [BR:
vip00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
vip03032
]
H9L11_00870 (gyrA)
03400 DNA repair and recombination proteins [BR:
vip03400
]
H9L11_00870 (gyrA)
Enzymes [BR:
vip01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
H9L11_00870 (gyrA)
DNA replication proteins [BR:
vip03032
]
Prokaryotic type
DNA Topoisomerases
H9L11_00870 (gyrA)
DNA repair and recombination proteins [BR:
vip03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
H9L11_00870 (gyrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
DUF6674
Motif
Other DBs
NCBI-ProteinID:
QRZ22723
LinkDB
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Position
1:complement(170720..173431)
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AA seq
903 aa
AA seq
DB search
MSDLAKEITPVNIEDELRGSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMNVLGNDWN
KPYKKSARVVGDVIGKYHPHGDSAVYDTIVRMAQPFSLRYMLVDGQGNFGSIDGDSAAAM
RYTEVRMAKIAHELLADLDKETVDYVPNYDGTEQIPAVLPTKIPNLLVNGASGIAVGMAT
NIPPHNLGEVIDGCLAYINNEEITIDELMDYIPGPDFPTAALISGRKGIVDAYKTGRGKI
YMRSKADIEVEKNGKETIIVTEIPYQVNKARLIEKIAELVKDKKVEGISALRDESDKDGM
RIVIECKRDAVGEVVLNNLYAQTQLQTTFGINMVALNNGQPQLFNLKDMLKCFVDHRREV
VTRRTIFELRKARERAHILEGLALALANIDEIIELIRKAPTPAEAKAGLIARGWDLGNVS
AMLERAGTDAARPEWLEPEYGIRDGQYFLTEQQAQAILDLRLHKLTGLEHEKILGEYKTL
LEEIAELMHILASTERLMEVIREELEAVRDGFGDARRTEITAASHDIDMEELIAREDVVV
TLSHGGYVKYQVLSDYESQRRGGKGKSATKMKDEDHIERLLVANTHDNILCFSTRGKTYR
LKVYQLPLASRTARGKPIVNILPLEEGERITAILRVDEFSEDKFIFMATGDGTVKKTPLN
QFANVRSNGLIAVNLREDDSLIGVDITNGENEIMLFSKAGKVVRFKEAEEIPVLDENGKP
VLDENGQPEIKFKGVRPMGRTASGVRGMKLAENDQVVSLIVPSHEGDILTVTENGYGKRT
ALSEYPTKGRGTQGVVSIKVSERNGPVVGAIQVVEGDEMMMITDAGTLVRTRVGEVSQVG
RNTQGVTLIRTAEDESVVGLQRIEEVDDEELPADEDAEALESTDENTQQDAPAADDAEEG
NEE
NT seq
2712 nt
NT seq
+upstream
nt +downstream
nt
atgagcgatttagctaaagagatcacgcccgtaaacattgaagatgagcttagaggttca
tacctagactacgcgatgtcagtcatcgtgggtcgtgctcttccagatgtgcgtgatggc
ctaaaaccagtacaccgccgcgttttattcgcgatgaacgtactaggcaacgattggaac
aaaccatataaaaaatcagcccgtgttgtcggcgacgtaatcggtaaatatcacccacat
ggtgatagtgctgtgtacgacacaatcgtacgtatggctcagccgttctcgcttcgttac
atgctggtcgatggtcaaggtaactttggctcgatcgatggcgactctgctgcggcaatg
cgttacaccgaagttcgaatggcaaaaattgcccatgaactattggctgacctagacaaa
gaaaccgtagactacgtaccaaactacgacggtactgagcagatcccagcggttcttcca
actaaaattccaaacctattggttaacggtgcttctggtatcgcagtaggtatggcaacc
aacatcccgcctcataaccttggcgaagtgattgatggctgtcttgcatacatcaataat
gaagaaatcactattgatgaactaatggattacattcctggtcctgatttcccaacggcg
gcgcttatcagcggtcgtaaaggcattgtagacgcgtacaaaacaggtcgtggcaaaatc
tacatgcgttcgaaagcggacatcgaagtggagaagaatggtaaagagaccattatcgtc
actgaaattccttaccaggtgaacaaagctcgcttgatcgaaaagatcgctgagctagtt
aaagataagaaagtagaaggtatcagtgcactgcgcgacgagtcagataaagacggtatg
cgcattgttattgagtgtaagcgcgatgctgtgggcgaagtagttctaaacaatctttac
gctcagactcagctgcaaaccactttcggtatcaatatggtggctctaaacaatggccag
ccacagctattcaacctaaaagatatgttgaagtgcttcgttgatcaccgtcgtgaagtt
gtgacacgtcgtactatcttcgaactgcgtaaagcgcgtgaacgtgctcatatccttgaa
ggtttagctctagcgcttgctaacattgatgaaatcattgagcttatccgtaaggcacct
acaccggctgaagcaaaagcgggtcttatcgctcgtggttgggatttaggcaacgtttca
gcaatgctagagcgtgctggtacagatgctgcgcgccctgaatggctagagcctgaatat
ggtattcgtgatggtcagtacttcctgactgagcaacaagcacaagctatcctagatcta
cgtttacataaactaacaggtctagaacacgagaagattcttggcgaatacaaaacactt
ctagaagaaatcgctgaactcatgcatatccttgcgagcactgagcgtttgatggaagtg
atccgtgaagaacttgaagcggttcgtgacggctttggtgacgctcgtcgtacagaaatc
acagctgcgagccatgatattgacatggaagagctgatcgcacgtgaagacgttgtggtt
actctatctcacggtggttacgttaagtaccaagtactgagcgactacgagtcacagcgc
cgtggtggtaaaggtaagagtgcgactaagatgaaagatgaagaccatatcgagcgtctt
ctagtggcgaatacccacgataacatcttgtgtttctctactcgtggtaagacataccgc
ctgaaagtttaccaattgcctctagcgagccgtactgcgcgtggtaagccaattgtgaac
atccttccattagaagaaggtgagcgcattaccgcgattctacgtgttgatgaattctct
gaagacaaattcatcttcatggcaacaggtgacggtacggttaagaaaacgccgttgaac
cagtttgcaaacgtacgttcaaacggcctaatcgctgtgaacctacgtgaagacgattcg
ttaatcggtgtggatatcactaacggcgaaaacgaaatcatgctgttctctaaagcgggt
aaagtggttcgctttaaagaagcagaagagattccagtacttgatgaaaatggtaaacca
gttcttgatgagaatggtcagccagagatcaagtttaaaggtgttcgtcctatgggtcgt
accgcctctggtgttcgtggtatgaaactggctgaaaatgaccaagttgtatcacttatt
gttccttcgcacgaaggcgatatcctaacggttacagaaaacggttatggtaaacgtaca
gcacttagcgagtacccgacaaaaggtcgtggcactcaaggtgtagtttctatcaaagtt
tctgagcgaaatggcccggtagttggtgctatccaggttgttgaaggtgatgaaatgatg
atgatcaccgacgctggcacgttagtacgcactcgtgtgggtgaagttagccaagttggt
cgtaacacacaaggtgtaacgcttatccgtactgcggaagatgaatcagttgttggtttg
caacgtattgaagaagttgatgatgaagagctgcctgctgatgaagatgcagaagcgtta
gagtcaacagatgaaaatacgcagcaagacgctccagctgctgatgatgcagaggaaggt
aacgaagagtaa
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