Vibrio sp. sp1: H9L11_01340
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Entry
H9L11_01340 CDS
T11103
Symbol
lapB
Name
(GenBank) lipopolysaccharide assembly protein LapB
KO
K19804
lipopolysaccharide assembly protein B
Organism
vip Vibrio sp. sp1
Brite
KEGG Orthology (KO) [BR:
vip00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99986 Glycan metabolism
H9L11_01340 (lapB)
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_19
TPR_7
TPR_14
TPR_2
Zn_ribbon_LapB
TPR_16
TPR_12
TPR_8
TPR_20
TPR_1
ARM_TT21_5th
TPR_11
TPR_Slam
ANAPC3
ARM_TT21_N
TPR_15
ARM_TT21_C
TPR_CcmH_CycH
ARM_TT21
ARM_TT21_4th
TPR_9
Zn_ribbon_15
SPG48
DUF7129
Motif
Other DBs
NCBI-ProteinID:
QRZ22811
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Position
1:complement(281454..282629)
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AA seq
391 aa
AA seq
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MLELLFLLLPIAAAYGWYMGHRSAQQDKQKQSHQISRQYMTGLNLLLSDQSDKAVDHFIE
LLQVDNETIDTHLALGNLFRSRGEVDRAIRIHQNLISRSGLTLDQKNLALQQLAKDYMVS
GFLDRAEKIFEQLVEEPDYKEAALQQLVTIYQQTREWEKAIYYANQLAKLGNKRSRMRAN
IAHFWCEIAMLDQADGNTNKAIQHFKKALAEDPKCVRASIALGRIYLESEDYKHTIKYLT
GVLEQDKDFISDVLPTIAECYHHLGQEDELVEFLRACIDKKAGVSAELMLAQLVAHHENV
GAAQELLTKQLLKNPTMKGFYRLIDYHIAEAEDGRAKDSLSTLQAMVGEQLKVKPHYRCR
KCGFSTHSLYWHCPSCKGWGTIKPIRGLDGE
NT seq
1176 nt
NT seq
+upstream
nt +downstream
nt
atgcttgaactactcttcttgttgttgcctatagctgctgcgtatggctggtatatgggg
catcgcagcgctcagcaagacaagcagaagcaatctcatcaaatctctcgtcagtatatg
acgggtcttaatctgctgctctctgaccaatcagataaggctgtcgatcactttattgaa
ttgctccaagttgataacgagaccatcgatactcaccttgcgttgggtaacctgttccgg
tctcgtggtgaagtcgaccgcgcaatcagaattcaccaaaatcttatttctcgttcaggc
ttaacactggaccaaaagaacctcgcccttcaacagttagcgaaagactacatggtctct
ggttttcttgatcgtgcagagaaaatctttgaacagttagtcgaagagccagattacaaa
gaggcggctcttcaacaattagtgaccatttatcagcaaacacgagaatgggaaaaggcg
atttattacgcgaaccaattggctaagttaggtaataaacgctcaaggatgcgtgcaaat
attgcccatttttggtgtgaaatagccatgctcgaccaagctgatgggaatactaataag
gcaatacagcattttaaaaaagcgttagcggaagacccgaagtgtgttcgagcaagtatt
gctttgggacgaatttatctagagtctgaagactataagcacaccatcaaatatctgaca
ggggtacttgagcaagataaagactttatcagtgatgtcttgccaactattgcagaatgc
tatcatcatctgggtcaggaagatgaacttgtcgagtttctgcgagcttgtattgataag
aaagcaggcgtatcagccgagttgatgttggctcaattagttgctcatcacgagaacgtt
ggggctgctcaagagttactgacgaaacaattgctgaaaaacccaaccatgaagggcttc
taccgtttaattgactaccacattgcagaagcagaagatggtcgagcgaaagacagccta
tcaacactacaagcgatggtgggtgaacagttaaaagtgaaaccacattaccgatgccgg
aagtgtggattttctacccattccctttattggcattgtccgtcctgtaaaggatggggg
acgatcaagccaatccgcggattggatggtgaataa
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