Vibrio sp. sp1: H9L11_01710
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Entry
H9L11_01710 CDS
T11103
Name
(GenBank) sigma-54-dependent Fis family transcriptional regulator
KO
K10912
two-component system, repressor protein LuxO
Organism
vip Vibrio sp. sp1
Pathway
vip02020
Two-component system
vip02024
Quorum sensing
vip05111
Biofilm formation - Vibrio cholerae
Brite
KEGG Orthology (KO) [BR:
vip00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
H9L11_01710
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
H9L11_01710
05111 Biofilm formation - Vibrio cholerae
H9L11_01710
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
vip02022
]
H9L11_01710
Two-component system [BR:
vip02022
]
Lux family
LuxQN/CqsS-LuxU-LuxO (quorum sensing)
H9L11_01710
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Response_reg
Sigma54_activ_2
AAA_lid_14
HTH_8
AAA_5
Mg_chelatase
AAA_16
AAA
AAA_2
HTH_23
AAA_19
AAA_22
HTH_7
TIP49
PIF1
Motif
Other DBs
NCBI-ProteinID:
QRZ22883
LinkDB
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Position
1:complement(364092..365498)
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AA seq
468 aa
AA seq
DB search
MQQKPEGPKSRYLLMVEDTASVAALYRSYLTPLGIDINIVGTGRDAIESLNHRIPDLILL
DLRLPDMTGMDVLHAVKKSHPDVPIIFMTAHGSIDTAVEAMRHGSQDFLIKPCEADRLRV
TVNNAIRKATKLKNEADNPGNQSYQGFIGSSQTMQQVYRTIDSAASSKASIFITGESGTG
KEVCAEAIHAASKRGDKPFIAINCAAIPKDLIESELFGHVKGAFTGAANDRQGAAELADG
GTLFLDELCEMDLDLQTKLLRFIQTGTFQKVGSSKMKSVDVRFVCATNRDPWKEVQEGRF
REDLYYRLYVIPLHLPPLRERGEDVIEIAYSLLGYMSHEEGKSFIRFAPDVIERFNSYEW
PGNVRQLQNVLRNIVVLNNGKEITLDMLPPPLNQPLDRPSSVAKLIEPKAMTASEIMPLW
MTEKMAIEQAIEACDGNIPRAAGYLDVSPSTIYRKLQAWNGKEERQKV
NT seq
1407 nt
NT seq
+upstream
nt +downstream
nt
atgcaacaaaaacccgaaggcccaaagtctcgttaccttttaatggtcgaggacaccgca
tctgttgcggctctgtaccgctcatacctgacaccgcttggcatagatatcaatattgtc
ggcacaggtagggatgccattgagagcctaaatcatcgaattccagatcttattttactc
gatctccgtctgccagatatgacggggatggacgttttacatgccgttaaaaagagtcat
cccgacgtacctataatctttatgacggcgcatggttctatcgataccgctgtcgaggcc
atgcgtcatggctcacaagactttttaatcaaaccgtgtgaagcagaccgtttacgtgtc
acggttaacaatgccattcgtaaagcgaccaagctaaaaaatgaagccgataatccaggc
aatcagagctatcaggggtttatcggcagtagccaaaccatgcagcaggtttaccgtacg
atagattcagcggcgagcagtaaagcgagtatttttatcacaggtgaaagtggtactggt
aaagaggtatgtgccgaggctattcacgcagcaagtaaacgtggtgacaaaccttttatt
gcaattaactgtgctgcaattccaaaagatttgattgagagtgaactgtttggtcacgta
aaaggggcctttactggcgctgcgaatgatcgtcaaggtgctgctgagttagcggatggc
ggcacactttttctagatgagctttgtgagatggacttggatttacaaaccaagttgcta
cgatttattcaaacgggcacattccaaaaagtgggttcctcaaaaatgaagagcgtggat
gtgcgctttgtttgtgccactaaccgtgatccctggaaagaggtacaagaaggtcgattc
cgtgaagatttgtactatcgtttgtatgtcattcctttgcatttaccgcctttacgcgaa
cgaggcgaagatgttattgaaattgcatactcactgttaggttacatgtcacacgaagaa
ggaaaaagcttcatacgttttgcgcctgatgtcatcgagcgattcaacagctatgagtgg
ccgggtaacgttcgtcagttacaaaacgtgctacgcaatatcgttgttctaaacaacggt
aaagagattacgttggacatgttaccgccaccgttgaatcaaccgcttgaccgtccgtcg
tctgtggctaaattaattgagccgaaagcgatgaccgcatctgagattatgccattatgg
atgacggaaaaaatggcaatcgagcaagcgattgaagcatgtgatggcaatattcctcga
gcggcgggataccttgatgtcagtccgtcgacgatttaccgcaagttacaggcatggaac
ggcaaggaagagcggcaaaaagtatga
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