Vibrio sp. sp1: H9L11_01715
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Entry
H9L11_01715 CDS
T11103
Symbol
uvrB
Name
(GenBank) excinuclease ABC subunit UvrB
KO
K03702
excinuclease ABC subunit B
Organism
vip Vibrio sp. sp1
Pathway
vip03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
vip00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
H9L11_01715 (uvrB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
vip03400
]
H9L11_01715 (uvrB)
DNA repair and recombination proteins [BR:
vip03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
H9L11_01715 (uvrB)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
H9L11_01715 (uvrB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrB_inter
UvrB_3rd
Helicase_C
UvrB
ResIII
UVR
DEAD
AAA_30
UB2H
AAA_22
Orbi_NS3
Motif
Other DBs
NCBI-ProteinID:
QRZ22884
LinkDB
All DBs
Position
1:complement(365790..367820)
Genome browser
AA seq
676 aa
AA seq
DB search
MSKVYELVSDYQPSGDQPGAINQLLEGLDAGLAHQTLLGVTGSGKTFTLANVIAQAQRPA
ILLAPNKTLAAQLYGEMKSFFPNNAVEYFVSYYDYYQPEAYVPTTDTFIEKDASVNAHIE
QMRLSATKALLERKDAIIVASVSAIYGLGDPESYLQMMLHLRRGDVIDQRDMLRRLAELQ
YSRNDVAFERGQFRVRGEVIDIFPAESDQDAVRVEMFDDEVDCISVFDPLTGVVKQRDLP
RYTIYPKTHYVTPRDRILEAIENIKVELEVRKKQLLDNNKLLEEQRISQRTQFDIEMMNE
LGFCSGIENYSRYLSGRSEGEPPPTLFDYLPHDGLLIIDESHVTVPQIGAMYKGDRSRKE
TLVEFGFRLPSALDNRPLKFEEFEALAPQTIFVSATPGNYELEKSAGDVADQVVRPTGLL
DPELEVRPVATQVDDLLSEIRIRAAKDERVLVTTLTKRMAEDLTEYLHEHDVKVRYLHSD
IDTVERVEIIRDLRLGEFDVLVGINLLREGLDMPEVSLVAILDADKEGFLRSERSLIQTI
GRAARNIEGKAILYADRITNSMKKAMDETNRRREKQEAYNEEMGISPQALKRNIKDIMEL
GDITKSKRQRNTKQVPLSKVAEPSQTYEALSPQQLEKEISRLEAAMYQHAQDLEFELAAQ
KRDEIEKLRAQFIANS
NT seq
2031 nt
NT seq
+upstream
nt +downstream
nt
atgagtaaagtctatgaattggtctccgattatcagccgtcgggcgatcaaccaggagcg
atcaatcagttgcttgaggggctcgatgctgggctagcacatcaaacattgttgggggtc
acaggctcaggtaaaaccttcacactagcgaatgtgattgctcaagcccaacgacctgca
atattacttgcgccaaacaaaacgcttgctgctcagttatatggtgagatgaagtcattc
tttcctaataatgcggttgagtattttgtttcttactatgattactaccaacctgaagca
tacgttcccacaacagatactttcattgaaaaggacgcttcggttaacgcccacattgag
caaatgcgactgtctgccactaaagctttattggaacggaaagacgctattatcgttgct
tcggtttcagctatctatggtttgggtgatccggaatcctacttacaaatgatgcttcat
ttgcgacgtggagatgtgattgatcagcgtgatatgcttcgtcgcctagcggagctccaa
tactcgcgcaatgacgttgcatttgagcgtggccaattccgtgttcgaggtgaagtgatt
gacatcttcccagccgaatcagaccaagacgctgtgcgcgttgagatgtttgacgatgag
gtggattgcatcagtgtgttcgacccattgacaggcgtggtcaaacaacgagacttgccg
cgctataccatctatcccaagacgcactatgtcacgccaagagatcgcattcttgaagcg
attgaaaatattaaagtcgaactagaagtgcgcaaaaagcagcttctagataacaacaag
ctactggaagagcagcgaattagccagcgcactcaattcgatatcgaaatgatgaatgag
ttgggcttttgctccggtatcgaaaactattctcgttatctcagtggacgctcggaaggt
gagccgccaccaaccctgtttgactacttacctcatgatggcttgttgatcatcgatgaa
tctcacgtgacagtaccgcagataggtgccatgtataaaggtgaccgttcgcgtaaagaa
acgctggtggagtttggtttccggttaccttcagctttggataatcgtccactgaagttt
gaggagtttgaagcactagcgccacaaacgattttcgtctctgctacgcccggaaattac
gaactagaaaaatcggcgggtgatgtggcggatcaagtcgttcgtccaacaggcttgctt
gaccctgagttggaagttcgcccagtagcgacccaagtcgacgacctattgtctgagatc
cgtattcgcgctgctaaagatgaacgagttctggttacaacactgaccaaacgaatggct
gaagatctcaccgaataccttcacgaacatgatgttaaggtacgttatttacactcagac
attgatactgttgagcgtgtggaaattatccgtgaccttcgtcttggggaatttgacgtg
ctggtgggaataaacttattgagagagggcctggatatgccagaggtctcgttagttgca
attttggatgcggataaagagggcttcttgcggtctgaacgctcactcattcagaccatt
ggtcgtgctgcacgaaacatcgaaggtaaggcgattttatacgctgaccgaatcaccaac
tcaatgaaaaaggcgatggatgaaactaaccgtcgtcgcgagaagcaggaagcgtacaac
gaagaaatgggtatttcgccacaagcgctcaaacgaaatatcaaagacatcatggaactt
ggcgatatcactaagtctaaacgccagcgtaacactaaacaggtaccattatcgaaagtg
gcggagccttcgcaaacttacgaggcactgtcccctcagcagctagaaaaagaaatcagt
cgactggaggcagcgatgtatcagcatgcgcaagatttagaatttgagttagcggcacaa
aagcgtgacgagattgaaaaactacgagcgcagttcatcgcaaatagttga
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