Vibrio sp. sp1: H9L11_03060
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Entry
H9L11_03060 CDS
T11103
Symbol
recC
Name
(GenBank) exodeoxyribonuclease V subunit gamma
KO
K03583
exodeoxyribonuclease V gamma subunit [EC:
3.1.11.5
]
Organism
vip Vibrio sp. sp1
Pathway
vip03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
vip00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
H9L11_03060 (recC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
vip03400
]
H9L11_03060 (recC)
Enzymes [BR:
vip01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
H9L11_03060 (recC)
DNA repair and recombination proteins [BR:
vip03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
H9L11_03060 (recC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_V_gamma
RecC_C
Motif
Other DBs
NCBI-ProteinID:
QRZ23140
LinkDB
All DBs
Position
1:complement(647356..650847)
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AA seq
1163 aa
AA seq
DB search
MFTVYHSNQVDVLKSLLVELIRISPLENPFEKEQILVQSPGMSQWLKMELAKEFGVAANI
DFPLPATFIWEMFTQVLPDVPKRSAFNKEAMTWKLMHLLPGLLNQEVFSPLAQYLKDDID
HSKLYQLAEKIADIFDGYLVYRPEWIASWEAGQSVPELEDEHPWQPILWQALYDHTVSLG
QSPYHRANLYEHFIDTLESFNGNFDHLPKRLFVFGISSLPPRYMDALKAIGEHIDVHLMF
TNPCRYYWGEVRDRKYLARLAAKHRQHVVWQDDHSEVQGETEQLKGSLEDNVIDELHTDV
VGNSLLASMGKLGRDNMYLLSQLESHEVEAFVDVERDSLLHQLQADILNLEEHQDDQQIE
NSHHKQVVSLGDKSLSLHACHSPMREVEVLHDQLLAMFDADPTLKPRDIIVMVADINAYS
PAIQAVFGNAPGERFIPYSISDRTADQESPILAAFMQLVNLPNTRCLASELLELLETPAI
LKRFELSEGDFLQAKQWVEESGIRWGLDANTGREFELPETRQNTWQFGIQRMLLGYAMPE
SAGLFETEQGSLSPYNEVQGMGAELAGKLAHFIQQISTYRSKLSHVQTIDGWRETLVSLL
DDFFSVELEGEMALKSIRDTLSQLKEQLADAAFDDALSPSIISQYLQNKLSGTRVSQRFL
AGQVNFCTLMPMRSIPFRTVCLLGMNDGVYPRSMPPEGFDLMTGRTKPGDRSRRDDDRYL
FLEAMLSAQQTLYISYVGRSIQDNTERVPSVLVSELMEYCHQNYCLSGDEALPVDESGDN
LLNALVNTHAMVPFSPSAFQGMHASYAKEWIPAALTQSSQSQGYVRRDFNRALDDYLLGA
TFPLELDLVELQRFWRLPVQYFFNRRLKVIFEPPLPVMEDDEPFVLGGLESYQMRDELLE
TLLETTLMQPEKKTEVLKHFMSQQRAQGKLPVGAFGDIEFETNRVQAEELVDKLAFLSGA
PQDDLEIDLTFDSLFERNEGEEKNVRLTGWLTQCYQSGLIRYRSGKIRSQDYLAAWIDHL
AMSASGHAKKTHIIGYDRKEGALHLIYPEIADVQYAKHLLTELVRLFFEGMTKPLPYFPK
TALACVEAGFSRGQWVDDEEKSLKKMANAFNDGFMSPGEGNNSYISRIWPAWNDELASEV
RLLTALVLQGARLAVQDADDVKA
NT seq
3492 nt
NT seq
+upstream
nt +downstream
nt
ttgtttactgtttatcactccaaccaagttgacgttcttaaatcactccttgtcgaactg
attcgaatcagtccgctggaaaacccgttcgaaaaagaacaaattctggttcaaagtcca
ggcatgtcccagtggctaaaaatggaattggccaaagagtttggtgttgccgcgaacatt
gattttccgctccctgcgactttcatttgggaaatgtttacgcaggtattgccagacgtg
ccaaaacgcagtgcgtttaacaaagaagcgatgacgtggaagttgatgcatttgcttccg
gggcttctcaaccaagaggtgttttcgccgttagcgcagtacctcaaagatgacattgac
cactctaagctgtatcagctggctgagaaaattgccgatattttcgatggttacttggtg
tatcgtccggaatggatcgcaagttgggaagctgggcagagtgtgccagagctggaagat
gagcatccgtggcagccgatcttatggcaagcgttgtatgatcacactgtgtcattagga
cagtctccatatcaccgtgccaacctttatgagcactttatcgacacgttagagagtttt
aacggcaattttgaccatttacccaagcgtttgtttgtttttggcatttcttcgttgccg
cctcgctatatggatgcgctaaaagcaattggtgaacacatcgacgtgcatctgatgttc
accaacccgtgtcgttattactggggtgaagttcgagatcgcaaatatctggctcgtttg
gcggcgaaacatcgtcagcacgttgtgtggcaggacgatcactcggaagtgcaaggtgaa
actgagcaactgaaaggatcactggaagataatgtgatcgatgagctgcacaccgatgtg
gtcggaaacagtctgttggcatccatgggtaaactcgggcgcgacaatatgtatctgttg
tctcagctggaatctcatgaagttgaagcctttgttgatgttgagcgcgacagtctgctc
catcaattgcaagcggatattctcaatcttgaagaacatcaagatgaccaacagattgaa
aacagtcatcacaaacaagtggttagcttgggtgataaatcactgagcctacacgcttgt
cacagcccgatgcgtgaagtggaagtgctgcatgatcaactgttggcgatgttcgatgct
gacccaacgttaaaaccgcgcgatattatcgtgatggtcgcggacatcaacgcttacagc
cctgcgattcaggcggtctttggtaacgcgccgggtgagcgttttattccatattcgatt
tctgaccgaaccgccgatcaagagagcccaattctggccgcatttatgcagttggtgaac
ttacccaatacgcgctgtttggcatcagaactactcgaacttctggaaactccggcgata
ttaaagcgttttgaactcagcgaaggtgatttcttacaggctaaacaatgggttgaggaa
tcgggaattcgctgggggttggacgccaataccggacgcgaatttgaactgccggaaacc
cgtcaaaacacatggcaatttggtattcaacgcatgttgcttggctacgcgatgccagaa
tccgcaggcttgtttgaaaccgagcaaggcagtttgtctccgtacaacgaagtgcaaggc
atgggcgcagagctggcgggcaagttggcacactttatccaacaaattagcacttatcga
agcaaactttctcatgttcaaactatcgatggttggcgagagactttggtttcactgctg
gatgacttcttctcggttgagttagaaggcgaaatggcgctcaaatccattcgcgatacg
ctcagccaactcaaagagcaattagctgatgccgcatttgatgatgcgttatcgccgtcg
atcatcagccaataccttcaaaacaaattatctggcacaagagtcagccagcgcttcctg
gctggtcaagtgaacttttgtaccctgatgccgatgcgctctattccgtttagaaccgtt
tgtctgttggggatgaatgacggcgtgtatccgcgttccatgccgccagaaggctttgac
ttgatgaccggaagaaccaaaccgggcgaccgttcgcgccgagatgatgaccgttaccta
ttcctcgaagcaatgctatcggcacagcaaacgctatacatcagttatgttggccgttca
atccaagacaataccgagcgagtgccttcggttctggtttctgagctgatggaatactgc
caccaaaactattgtttaagtggtgatgaagcgttgcccgttgatgagtctggcgacaac
ttattaaatgcgttggtgaatacccacgccatggtgccgtttagcccaagtgcgttccaa
ggcatgcacgccagctacgcgaaagagtggattccagcagcattgactcaaagtagtcaa
tcgcaaggctatgttcgtcgtgattttaatcgggcattagacgactatctgttaggagcg
acgttcccacttgagctcgacttagtcgagttgcaacgtttctggcgcttaccggtgcag
tattttttcaatcgtcgcttaaaagtaatctttgagccgccactgccggtgatggaagac
gacgaaccctttgttttaggtggtttggaaagttatcaaatgcgtgatgagctgttagaa
accttgcttgaaacgacattgatgcagccagagaaaaaaacagaggtgcttaaacacttt
atgagtcaacagcgcgcgcaaggcaaactgccggtgggggcgtttggtgatatcgagttt
gaaaccaaccgagttcaggcggaagagctggtggataaactggcgtttttatctggtgcg
cctcaagacgatttggaaatcgacctgacgtttgattccttgtttgagcgaaatgaaggc
gaagagaaaaacgttcgcctaacaggttggctgactcaatgctaccaatccggtttgatt
cgctatagaagcggtaagattcgctcgcaggattaccttgctgcgtggatcgatcacctt
gccatgtcggcgtcgggtcatgctaagaaaactcacatcattggttacgatcgtaaagaa
ggcgcgctgcatttgatctacccagaaattgccgatgtgcagtatgccaaacatctactg
actgaattagttcgcttattcttcgaaggcatgactaagcctttgccttatttcccgaaa
acggcgttggcttgtgttgaagcgggctttagccgtggtcagtgggtcgatgacgaagag
aaatctttgaagaaaatggctaacgcattcaatgatggcttcatgagcccgggcgaaggc
aataattcgtacatctctcgaatttggcctgcttggaatgatgagttggcctcagaagtt
cgtttgctgacagcattagtactgcaaggtgcgcgcttagcggttcaagacgctgatgat
gtaaaagcgtga
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integrated database retrieval system
