Vibrio sp. sp1: H9L11_03215
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Entry
H9L11_03215 CDS
T11103
Symbol
radA
Name
(GenBank) DNA repair protein RadA
KO
K04485
DNA repair protein RadA/Sms
Organism
vip Vibrio sp. sp1
Brite
KEGG Orthology (KO) [BR:
vip00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
vip03400
]
H9L11_03215 (radA)
DNA repair and recombination proteins [BR:
vip03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
H9L11_03215 (radA)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATPase
AAA_25
Zn_ribbon_LapB
ChlI
DnaB_C
Lon_C
DUF7125
GvpD_P-loop
Rad51
SLFN-g3_helicase
AAA
RecA_N
AAA_16
AAA_22
ABC_tran
AAA_14
nSTAND_NTPase5
NTPase_1
nSTAND3
AAA_24
Zeta_toxin
AAA_29
Viral_helicase1
AAA_5
Zn_ribbon_8
Zn_ribbon_Thio2
zinc_ribbon_6
Motif
Other DBs
NCBI-ProteinID:
QRZ23170
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Position
1:complement(685389..686768)
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AA seq
459 aa
AA seq
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MAKAKRAYVCNDCGADFPRWQGQCNACGAWNTITEVRIAASPTVARNERLSGYAGSATEA
TVQTLSEIDLQEVPRFTSGFKELDRVLGGGVVPGAAILIGGNPGAGKSTLLLQTMCSLSA
QMPTLYVTGEESLQQVAMRASRLGLPKDHLKMLSETNVDKICQIAEKEQPRIMVIDSIQV
MHVSDVQSSPGSVAQVRESATALTRYAKQNNVAVFIVGHVTKDGTLAGPKVLEHIIDCSV
LLDGGTDSRFRTLRSHKNRFGAVNELGVFAMTGQGLKEVSNPSAIFLSRGEEETSGSSVM
VVWEGTRPLLVEIQALVDYSQLANPRRVAVGLEQNRLSLLLAVLHKHGGLQMADQDVFVN
VVGGVKVTETSADLALVMALLSSFRDRPLPKDVVIFGEVGLAGEIRPVPSGQERLNEAFK
HGFKKAIVPAANMPKGGIPGMQIHGVKKLSEAIEAFDEL
NT seq
1380 nt
NT seq
+upstream
nt +downstream
nt
atggcgaaagcaaaacgagcgtatgtttgtaatgattgtggcgcggactttccccgttgg
caggggcagtgtaacgcatgtggtgcatggaatacgataacagaagtacgtatcgctgca
tcgccaaccgttgctcgcaatgaacgcttaagcggctacgctggttccgcaacagaagct
acggttcaaacgctatccgaaattgatctgcaagaagtacctcgcttcaccagtgggttt
aaagagcttgaccgtgtgttgggtggtggggttgtgccaggtgccgcaattttgattggt
ggtaaccctggtgcaggtaaatcaacacttctgttgcaaaccatgtgtagtttatctgcg
caaatgccaacgctttacgtaaccggtgaagagtcgttacagcaggtggcaatgcgtgct
tcccgattgggcttgccgaaagatcatttaaaaatgctatcggaaacgaacgtcgacaaa
atttgccaaatcgccgaaaaagagcagcctcgtataatggtaatagactcgattcaggtg
atgcacgtttctgatgttcaatcgtcgcctggcagtgttgctcaggtacgtgaatctgcg
acggctctgacacgatacgcaaaacagaataatgttgcggtatttattgttggtcacgta
acaaaagatggtacccttgcgggccccaaagttcttgaacacattatcgactgttcggta
ctactcgatggtggaacggatagccgattccgcactttgcgtagtcataaaaaccgtttt
ggcgctgtgaatgagcttggtgtctttgcaatgacaggccaaggattgaaagaagtgagt
aacccatcagcgatcttcctttctcgtggtgaagaagaaacatcaggctcttccgtcatg
gttgtttgggaaggcacgcgccctctactagtagagattcaagcgctggtggattactcg
cagttagccaaccctcgtcgtgttgcggtcggcttggagcagaaccgcctatcacttttg
ctcgctgtattgcataagcatggtggcttacaaatggcagaccaagatgtctttgttaat
gtggttggcggtgttaaggtgacggagacgagcgctgatcttgctttagttatggcgctt
ttatcgagttttcgtgaccgtccactccctaaagatgtggtgatttttggtgaggtaggg
cttgcgggcgaaatccgtcctgtgccaagtgggcaagagcgtttgaatgaagcgttcaaa
catggtttcaagaaagccatcgtgccagcagccaacatgccgaaaggtggcatccctggc
atgcaaattcacggcgttaagaaattgtcggaagctatagaggcttttgacgagctgtaa
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