Vibrio sp. sp1: H9L11_03560
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Entry
H9L11_03560 CDS
T11103
Symbol
mrcB
Name
(GenBank) penicillin-binding protein 1B
KO
K05365
penicillin-binding protein 1B [EC:
2.4.99.28
3.4.16.4
]
Organism
vip Vibrio sp. sp1
Pathway
vip00550
Peptidoglycan biosynthesis
vip01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
vip00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
H9L11_03560 (mrcB)
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
vip01003
]
H9L11_03560 (mrcB)
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
vip01011
]
H9L11_03560 (mrcB)
Enzymes [BR:
vip01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.99 Transferring other glycosyl groups
2.4.99.28 peptidoglycan glycosyltransferase
H9L11_03560 (mrcB)
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
H9L11_03560 (mrcB)
Glycosyltransferases [BR:
vip01003
]
Polysaccharide
Bacterial polysaccharide (excluding LPS)
H9L11_03560 (mrcB)
Peptidoglycan biosynthesis and degradation proteins [BR:
vip01011
]
Peptidoglycan biosynthesis and degradation
Glycosyltransferase/DD-Transpeptidase (Class A PBP)
H9L11_03560 (mrcB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Transgly
UB2H
Transpeptidase
HC2
Motif
Other DBs
NCBI-ProteinID:
QRZ23234
LinkDB
All DBs
Position
1:complement(773009..775381)
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AA seq
790 aa
AA seq
DB search
MTDSKKPSAKKAPAKKSTTNKGAAKQTRRTPSKKPTNEKRSWLKVLWSFSWKAGVALAAV
LLFVGIYLDSVVKERFEGQLFELPTVVYARILNLSPGENITIQELRNELDVLNYRKVSQP
RYPGEYSSSSTRIELIRRPFEFADGPEPDRHIMLHFSDSGLQRIQSLESRGDLGYLRLEP
KMLGMLEKDRDEQRLFLRRDQFPEILVDALLATEDRDFYQHDGVSPLAIARALVANIKAG
RTVQGGSTLTQQLAKNLFLTRDKTLWRKVREAYIALILDYRYSKDRILEAYLNEVYLGQS
GGEAIHGFGLASRYYFGQPIQELRIDQLAMLVGMVKGPSYYNPIRYPERTKERRDLVLRL
LMQQNMLTSEQYEQAVSRPLDTQSKPRIASRQPAYFQQLSIELKEKVGERFKAETGLRVF
TSLDPVSQSKMEQAIAKKIPELAKRGGKELEAAAVAVDRHSGEIRAMVGGKRVGYEGFNR
ALNASRPIGSLVKPAIYLTALEQPDKYNLGTTLHDTPLSLKSSKGNVWTPRNYDRKYRGD
VPLYIALAKSLNVPTVRLGMALGIPEVSNTLERLGVNKDEIRPVPSMFLGSFSLTPFEVA
QMYQTLTNSGKRAKLTALRSVMDMEGNVLYQSLPRSSRAVDEQAAWLTTYAMKQGVAQGT
GRFLQSQFGWAALAGKTGTSNDNRDSWFVGVDGREVTTIWLGRDDNKPVNLTGSSGALRV
YAEYLKQRIPERLELPWPREITTLGFKPTSDGGLEMNCRSDYKLPVWDKTGQIKQQCEKK
SNWLNSIFDW
NT seq
2373 nt
NT seq
+upstream
nt +downstream
nt
atgactgacagcaagaagcctagcgcgaaaaaagcgccagcgaagaaaagtacaaccaat
aaaggagccgcaaaacagactcgacgtacgccgagtaaaaagccgactaacgagaaacgt
tcgtggttgaaagttctgtggtcgtttagctggaaagctggcgttgcacttgccgctgtt
ttgctgtttgttgggatttacttagatagtgtggtgaaagaacgctttgaaggtcagctg
tttgagctgccaacggtggtttatgcccgtatcttgaatctaagccctggtgagaatatc
accatccaagaactgcgcaacgagctagatgtgttgaattaccgtaaagtgagtcaacct
cgttacccaggcgaatattcctcttcttccactcggattgaattgattcgtcgtccattc
gagtttgccgatggtcccgagccggatcgtcacattatgctgcatttctctgattccggc
ttgcaacgtattcagtctttagaatctcgaggagaccttggttacttgcgcttagaaccg
aagatgttgggcatgctggagaaagaccgtgatgaacagcgccttttcttacgtcgtgat
cagttccctgaaattttggtggatgcactgcttgcgaccgaagaccgggatttttatcaa
catgacggggtgtcaccgctcgcgattgcacgtgcattggttgcgaacattaaggcgggt
cgtactgttcaaggtggtagtacgctgactcagcaattggcaaaaaacctgtttttgact
cgtgataaaacactgtggcgtaaagttcgagaagcgtatatcgcgctaattttggattac
cgttacagcaaagatcgtatcttagaagcctacctaaacgaagtgtacctaggtcaaagt
ggaggtgaagcgatccacgggtttggcttggcgtcgcgttactattttgggcagccaatt
caggagttgcgaatcgatcagctggcgatgttagttgggatggtaaaaggaccgtcttac
tacaacccaattcgttaccctgagagaacgaaagagcgtcgtgatctcgttctgcgcctg
ttaatgcagcaaaacatgttgacttcagagcagtatgaacaagctgtaagtcgtccactc
gatacgcaaagcaagccacgtattgcgagccgtcagccagcttatttccaacaattgagt
attgaattaaaagaaaaagttggggagcgatttaaggcagagaccggactgcgcgtattt
acgtctctggacccagtatcgcaaagcaaaatggaacaagctatcgcgaaaaagatccca
gaactagctaaacggggtggtaaagagttagaagccgctgctgtggccgttgatcgccat
agtggtgaaatccgtgcgatggttggtggtaaacgtgtcggttatgaaggctttaaccga
gcgctcaatgccagtcgtccaattggttctttagtgaaaccagcgatttacttaacggct
ctagaacaaccggataaatacaacctaggcacgacgctacacgacacgccgttaagtctg
aagagcagtaaaggtaacgtgtggacgccgcgcaactacgatagaaaatatcgtggtgat
gtgccactttacattgctttagcgaaatcacttaacgtaccaaccgtgcgcttaggtatg
gcacttggcattcctgaagtgtccaatactttagagcgtttgggcgtgaacaaagacgaa
attcgcccagtgccttcgatgtttttgggttcgttttctttgacgccattcgaagttgca
cagatgtatcagactctgacgaattcaggtaagcgtgcaaaactgaccgctctgcgctca
gtcatggatatggaaggtaatgtgctgtatcaatccttgcctcgttcatcaagagccgtg
gatgaacaagctgcatggctaacgacctacgcgatgaaacaaggggttgctcaaggcact
ggccgcttcttacaaagccagtttggttgggctgcattggcaggaaaaacgggtaccagt
aatgacaaccgcgatagttggtttgtcggtgttgatggtcgtgaggtgacgacaatttgg
ctaggccgcgacgataataaacccgtgaatctaacggggtcgagtggtgcattacgagtg
tacgcagagtacttgaagcagcgtattcctgagcgcttagagctcccatggccaagagaa
atcaccacattagggttcaagcctacatctgatggaggtttagaaatgaactgccgtagt
gattacaaactgccggtttgggataaaaccggtcagataaagcaacagtgtgagaagaaa
tcaaactggttaaatagcatatttgattggtag
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