Vibrio sp. sp1: H9L11_05970
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Entry
H9L11_05970 CDS
T11103
Symbol
trmA
Name
(GenBank) tRNA (uridine(54)-C5)-methyltransferase TrmA
KO
K00557
tRNA (uracil-5-)-methyltransferase [EC:
2.1.1.35
]
Organism
vip Vibrio sp. sp1
Brite
KEGG Orthology (KO) [BR:
vip00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
vip03016
]
H9L11_05970 (trmA)
Enzymes [BR:
vip01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.35 tRNA (uracil54-C5)-methyltransferase
H9L11_05970 (trmA)
Transfer RNA biogenesis [BR:
vip03016
]
Prokaryotic type
tRNA modification factors
Methyltransferases
H9L11_05970 (trmA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
Methyltransf_25
Methyltransf_4
MTS
Cons_hypoth95
Methyltransf_31
Methyltransf_12
Methyltransf_15
Methyltransf_11
PrmA
DREV
DUF6579
TRM5-TYW2_MTfase
Motif
Other DBs
NCBI-ProteinID:
QRZ23624
LinkDB
All DBs
Position
1:1271633..1272742
Genome browser
AA seq
369 aa
AA seq
DB search
MATLDVNPQRYQEQLAEKVERLTDMFAPYNMPELEVFESPEQHYRMRAEFRVWHEGEDLY
YIMFNQETREKYRVDQFPAASRLINDLMPLLVEAMKDNDSLRRKLFQVDFLSTLSGEILV
SLLYHRQLDEEWIENAKALKQRLNDEGFNLNIIGRARKMKIVLDRDYVIEKLDVNGQSYI
YQQVENSFTQPNGKVAEKMLEWAVDCTQESTGDLLELYCGNGNFSLALAQNFDRVLATEL
AKPSVVSAQYNIAANKIDNVQILRLSAEEFTQAIEGKREFRRLQDAGVDLKSYNCNTIFV
DPPRAGMDVDTCKMVQGYERIMYISCNPETLKENLDILCETHNVTRFALFDQFPYTHHME
AGVLLERIK
NT seq
1110 nt
NT seq
+upstream
nt +downstream
nt
atggctactcttgatgtaaacccacaacgctaccaagaacaactggctgaaaaagtcgaa
cgtctcacggatatgttcgcgccatacaacatgccagaactggaagtgtttgaatcacca
gagcagcactaccgcatgcgtgctgagttccgtgtttggcatgaaggcgaagatctttac
tacatcatgttcaaccaagaaactcgtgagaagtaccgtgttgaccaattccctgcagca
agccgtctgatcaacgacctgatgccgctattggttgaagcgatgaaagacaacgactca
ctacgtcgtaaactgttccaagtggatttcctatcgacgctaagtggtgagattctggtc
tcactcctttaccatcgccaacttgatgaagagtggattgaaaacgcgaaagcccttaaa
cagcgtttaaatgatgaaggctttaacctaaacatcattggtcgcgctcgtaagatgaag
attgtcctagaccgagactacgttatcgagaagctcgatgtaaatggtcaaagctacatc
taccaacaagtagagaacagcttcactcagccgaacggcaaagtcgcagagaagatgctg
gaatgggcggtcgactgtacccaagaaagcactggcgacctactagagctttactgtggt
aacggtaacttctcgctggcgttggcacagaatttcgaccgcgtactggcaactgagcta
gcgaagccatctgtggtatctgcacagtacaacatcgccgccaataagattgataacgta
caaatcttacgtctatcggcagaggaatttactcaagcgatcgaaggtaagcgtgaattc
cgtcgtctacaagatgcaggtgtggatctgaagagctacaactgcaacacgatttttgtc
gatccaccacgtgctgggatggatgtcgatacttgtaaaatggtgcaaggttacgagcgc
atcatgtacatctcttgtaaccctgagactctaaaagagaacttggacattctatgcgaa
acacacaacgtgacgcgttttgctctgtttgaccaattcccttatacccaccacatggaa
gcgggcgtgctgctagagcgcattaaataa
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