Vibrio sp. sp1: H9L11_06135
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Entry
H9L11_06135 CDS
T11103
Symbol
rpoH
Name
(GenBank) RNA polymerase sigma factor RpoH
KO
K03089
RNA polymerase sigma-32 factor
Organism
vip Vibrio sp. sp1
Brite
KEGG Orthology (KO) [BR:
vip00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
vip03021
]
H9L11_06135 (rpoH)
Transcription machinery [BR:
vip03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
H9L11_06135 (rpoH)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
HTH_10
HTH_3
UCR_14kD
KORA
IF2_N
Motif
Other DBs
NCBI-ProteinID:
QRZ23655
LinkDB
All DBs
Position
1:complement(1303657..1304514)
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AA seq
285 aa
AA seq
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MTKEAYPMALVTQDSLDSYIRSVNSYPMLTADEERELAERLHYKGEIEAAKGLILSHLRF
VVHVARGYSGYGLPMADLVQEGNIGLMKAVKRFNPEVGVRLVSFAVHWIKAEIHEYVLRN
WRIVKIATTKAQRKLFFNLRKSKKRLGWFNNGEVETVARELGVEPSEVREMESRLAAVDS
TFDMPTDEDDSSNAYTAPMLYLEDKSSDVADNIEAANWEMHTNNRLGHALASLDERSQRI
VRSRWLDDEKATLQDLADEFGVSAERIRQLEKNAMKKLKLAVGEF
NT seq
858 nt
NT seq
+upstream
nt +downstream
nt
atgacaaaagaagcgtatccgatggctctagtcacgcaagatagccttgatagctatatt
cgctcagtaaacagctacccaatgctgactgcagacgaagagcgtgagctggcagaacga
ttacactataaaggtgagattgaggctgcaaaaggtctaattctttcgcacctacgattc
gttgttcacgttgctcgtggttactctggctacggtttgccgatggcggatcttgtgcaa
gagggtaacatcggtctaatgaaagccgttaagcgttttaacccagaagtaggggttcgc
ttggtttcttttgctgtccactggatcaaagcagagatccacgaatacgtgctacgtaac
tggcgtatcgtgaaaattgcgaccactaaagcgcaacgtaaattgttcttcaacctgcgt
aagtcgaaaaagcgcttgggttggtttaacaacggtgaagtggaaaccgttgcgcgcgag
ttaggtgttgagccttctgaagttcgcgagatggaatcacgcttagcggcggtggattca
acctttgatatgccaactgatgaagacgacagttcaaacgcttacacagcgccgatgcta
tacctagaagacaaatcgtctgatgtggccgacaacattgaagccgccaactgggaaatg
cataccaacaatcgcttgggtcatgcattagcgagtttggatgagcgtagtcagcgcatc
gtgcgttctcgttggttagatgatgagaaagcaacattgcaagacttagctgatgagttc
ggtgtttctgccgagcgtattcgccagctagaaaaaaatgcaatgaagaaactaaaattg
gctgtgggtgaattttaa
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