Vibrio sp. sp1: H9L11_06500
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Entry
H9L11_06500 CDS
T11103
Symbol
thiC
Name
(GenBank) phosphomethylpyrimidine synthase ThiC
KO
K03147
phosphomethylpyrimidine synthase [EC:
4.1.99.17
]
Organism
vip Vibrio sp. sp1
Pathway
vip00730
Thiamine metabolism
vip01100
Metabolic pathways
vip01240
Biosynthesis of cofactors
Module
vip_M00127
Thiamine biosynthesis, prokaryotes, AIR (+ DXP/tyrosine) => TMP/TPP
Brite
KEGG Orthology (KO) [BR:
vip00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00730 Thiamine metabolism
H9L11_06500 (thiC)
Enzymes [BR:
vip01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.17 phosphomethylpyrimidine synthase
H9L11_06500 (thiC)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
ThiC_Rad_SAM
ThiC-associated
Motif
Other DBs
NCBI-ProteinID:
QRZ23718
LinkDB
All DBs
Position
1:complement(1380063..1382003)
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AA seq
646 aa
AA seq
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MSSRKQARLEAKQFIDTLSVQPYPNSSKVYVEGSRPDIRVPMREISLADSLIGGTKEAPI
FEPNEPVRVYDTSGVYTDPEHTIDLYSGLPKLREGWIEERADTELLDEVSSVYTKERLED
ETLDDLRYGNLPRIRRAKDGHCVTQLHYARKGIITPEMEYIALRENMGRAQYRDEVLNQQ
HPGQSFGANLPKDITAEFVRKEVAEGRAIIPSNINHPESEPMIIGRNFLVKVNANIGNSS
VTSSIEEEVEKLVWATRWGGDTVMDLSTGRNIHETREWILRNSPVPIGTVPMYQALEKVN
GVAENLNWEVMRDTLIEQAEQGVDYFTIHAGLLLRYVPMTAKRVTGIVSRGGSIIAKWCL
AHHQESFLYTHFREICEICAKYDVALSLGDGLRPGSVADANDEAQFAELRTLGELTKVAW
EYDVQVIIEGPGHVPMHMIKENMEEQLEHCHEAPFYTLGPLTTDVAPGYDHITSGIGAAM
IGWYGCAMLCYVTPKEHLGLPNKEDVKVGMITYKLAAHAADLAKGHPGAQVRDNALSKAR
FEFRWEDQFNLSLDPDTARAFHDETLPQESGKVAHFCSMCGPKFCSMKISQEVREYAKDT
EQVAADQAISIKMLDDPLEGMRQKSQEFRDTGSELYHPAAHAEVSG
NT seq
1941 nt
NT seq
+upstream
nt +downstream
nt
atgtcgagtcgcaaacaagcgagactggaagcaaaacagttcattgatacactctcggta
caaccgtaccccaattcaagcaaagtctacgtagaaggctcacgtccagatattcgtgtg
ccaatgcgtgaaatatcactcgctgatagccttattggaggcacaaaagaagcgcctatt
ttcgagcctaatgagccagtacgcgtttacgatacctcgggtgtatacacagatccagag
cacaccatagacctctatagcggcttacctaagctgagagaagggtggattgaagagcgt
gccgatactgagctacttgatgaagtaagctcggtgtacaccaaagaacgcttagaagac
gaaacactagacgatcttcgttacggtaatctaccacgtattcgacgtgccaaagatggc
cattgtgtgacccaattgcactatgctcgcaaaggtataatcaccccagaaatggaatac
atcgccctgcgtgaaaatatggggcgtgctcaataccgcgatgaagtgctgaatcaacag
catccgggtcaaagctttggagcgaatcttccaaaagacattaccgccgagtttgtgcgt
aaagaagtcgccgaaggtcgcgcgattatcccttccaatatcaaccacccagaatccgaa
ccaatgatcattggacgtaactttttggtcaaagtgaacgccaacatcggtaactcatcg
gtcacttcttcgattgaagaagaagtagagaaactagtgtgggcaacgcgctggggtgga
gataccgttatggatctctctactggacgtaatattcacgaaactcgcgagtggattcta
cgtaacagtccagttccgatcggtaccgtaccaatgtatcaagcgcttgagaaagtgaat
ggtgtggcggaaaaccttaactgggaagtgatgcgcgatactctgatcgagcaagcagag
cagggcgttgattacttcaccatccatgccggtttactactgcgctatgtaccgatgacg
gcaaaacgcgttactggcatcgtctctcgtggtggttctatcatcgcgaaatggtgttta
gcgcatcaccaagaaagcttcttatatactcacttccgagagatctgtgaaatctgtgct
aagtacgatgtcgcactatctcttggtgatggtctgcgtcctggctcggttgctgatgct
aacgatgaagcgcaatttgcagagcttcgtactcttggcgaattgaccaaggttgcgtgg
gaatacgacgtacaggtgattattgaaggccctggtcatgttccaatgcatatgatcaaa
gagaacatggaagagcagttagagcactgtcatgaggctcctttctatactcttggtcca
ttgacgacagacgtcgctcctggttacgaccatattacttcaggtattggcgctgccatg
attggttggtatggctgtgcaatgctttgctacgtaactcctaaagagcatcttggttta
ccaaacaaagaagacgtgaaagtaggcatgatcacttacaagcttgctgcgcacgccgct
gatttggcgaaaggacaccctggtgcacaagttcgtgataacgcgctttctaaagctcgc
ttcgagttccgctgggaagaccaatttaacttgtcgctcgacccagataccgcgcgtgct
ttccatgatgaaaccttgcctcaagagtctggaaaagttgctcacttctgttcgatgtgc
ggaccaaagttctgctctatgaagatttcgcaagaggtacgagagtacgcaaaagatact
gagcaagttgctgcggaccaagctatatcgatcaaaatgctggatgatcctcttgagggg
atgcgtcagaaatcgcaagaatttagagatacaggttctgagttataccacccagcagca
catgccgaggtaagtggctaa
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