Vibrio sp. sp1: H9L11_06975
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Entry
H9L11_06975 CDS
T11103
Symbol
fadB
Name
(GenBank) fatty acid oxidation complex subunit alpha FadB
KO
K01825
3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:
1.1.1.35
4.2.1.17
5.1.2.3
5.3.3.8
]
Organism
vip Vibrio sp. sp1
Pathway
vip00071
Fatty acid degradation
vip00280
Valine, leucine and isoleucine degradation
vip00310
Lysine degradation
vip00362
Benzoate degradation
vip00380
Tryptophan metabolism
vip00410
beta-Alanine metabolism
vip00640
Propanoate metabolism
vip00650
Butanoate metabolism
vip00907
Pinene, camphor and geraniol degradation
vip00930
Caprolactam degradation
vip01100
Metabolic pathways
vip01110
Biosynthesis of secondary metabolites
vip01120
Microbial metabolism in diverse environments
vip01200
Carbon metabolism
vip01212
Fatty acid metabolism
Module
vip_M00087
beta-Oxidation
Brite
KEGG Orthology (KO) [BR:
vip00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00640 Propanoate metabolism
H9L11_06975 (fadB)
00650 Butanoate metabolism
H9L11_06975 (fadB)
09103 Lipid metabolism
00071 Fatty acid degradation
H9L11_06975 (fadB)
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
H9L11_06975 (fadB)
00310 Lysine degradation
H9L11_06975 (fadB)
00380 Tryptophan metabolism
H9L11_06975 (fadB)
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
H9L11_06975 (fadB)
09109 Metabolism of terpenoids and polyketides
00907 Pinene, camphor and geraniol degradation
H9L11_06975 (fadB)
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
H9L11_06975 (fadB)
00930 Caprolactam degradation
H9L11_06975 (fadB)
Enzymes [BR:
vip01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.35 3-hydroxyacyl-CoA dehydrogenase
H9L11_06975 (fadB)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.17 enoyl-CoA hydratase
H9L11_06975 (fadB)
5. Isomerases
5.1 Racemases and epimerases
5.1.2 Acting on hydroxy acids and derivatives
5.1.2.3 3-hydroxybutyryl-CoA epimerase
H9L11_06975 (fadB)
5.3 Intramolecular oxidoreductases
5.3.3 Transposing C=C bonds
5.3.3.8 Delta3-Delta2-enoyl-CoA isomerase
H9L11_06975 (fadB)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
3HCDH_N
ECH_1
3HCDH
ECH_2
Carboxyl_trans
NAD_binding_2
DUF5546
DAO
Motif
Other DBs
NCBI-ProteinID:
QRZ23803
LinkDB
All DBs
Position
1:complement(1474712..1476883)
Genome browser
AA seq
723 aa
AA seq
DB search
MIYQAETLQVKEIQDGIAELSFCSPKSVNKLDLATLESLDKALDALIAHQGLKGLLLTSD
KDAFIVGADITEFLGLFAKTDAELDQWLQFANSIFNKLEDLPVPTISVIKGHALGGGCEC
VLATDMRIGDKTTSIGLPETKLGIMPGFGGCVRLPRVIGADSAMEIITQGKACRADEALK
IGLLDAVVETDALYESALQTLNSAINEKLDWQARRAQKTSPLTLSKLESMMSFTMAKGLV
AQKAGPHYPAPMTAVITIEEGARFARNEALDIERKHFVKLAKSEEAKSLVGLFLNDQYIK
GIAKKAAKSASKDTQRAAVLGAGIMGGGIAYQSALKGVPVLMKDIAQASLDLGMTEASKL
LNKRLSRGRIDGFKMAGILASITPSLHYAGIENSDVVVEAVVENPKVKAAVLSEVESHVG
DDTVITSNTSTIPINLLAKSLKRPENFCGMHFFNPVHRMPLVEIIRGEHTSDETINRVVA
YAAKMGKSPIVVNDCPGFFVNRVLFPYFGGFSMLLRDGADFTKIDKVMERKFGWPMGPAY
LLDVVGIDTAHHAQAVMADGFPERMGKQGRDAIDALFEADKYGQKNGNGFYSYTIDKKGK
PKKTFSEAILPVLADVCADKQDFDDQTIIQRMMIPMINEVVLCLQEGIIATPQEADMALV
YGLGFPPFRGGVFRYLDSVGIAEYVEMAKQHAELGAMYQVPQMLIDMAAKGESFYGAQQQ
GSI
NT seq
2172 nt
NT seq
+upstream
nt +downstream
nt
atgatttaccaagccgaaaccctacaggtaaaggaaatacaagatggtattgcagagcta
agcttctgctctccaaaatccgtcaacaaactcgacctagcgacattggaatcgctagat
aaagctcttgatgcgctcattgcccatcaaggcctcaaggggttgttgctcacttcagat
aaagacgcattcattgtaggcgcagacattaccgagtttttaggtctgtttgctaaaacg
gatgccgagctcgaccaatggctgcaatttgctaatagcatctttaacaaattagaagac
ttacccgttccgaccatttcagtgatcaaaggccacgctcttggtggcggttgtgaatgt
gtgctagcaacagacatgcgtattggtgacaaaaccaccagcatcggcctaccagaaacg
aaactgggaatcatgccaggctttggtggttgtgtacgcttacctcgcgttattggcgca
gacagcgcaatggaaatcatcacccaaggtaaagcatgccgagctgatgaagcattgaaa
attggcttactcgatgcagttgtagagactgatgctttatacgaatcagcactacaaact
cttaactctgcaattaacgagaaacttgactggcaagcacgccgagcacagaaaacatct
ccgctaacgctgagtaagcttgaatcaatgatgagcttcaccatggcgaagggtctggtg
gcacaaaaagcaggtcctcactaccctgccccaatgacagccgttatcacgattgaagaa
ggtgctcgctttgcacgtaatgaagcgttagacattgaacgtaagcacttcgtgaaattg
gctaaatcggaagaagcaaaatcactcgttggcctattccttaatgatcaatacatcaaa
ggcattgcgaaaaaagcagcgaagtcagcaagtaaagacacgcaacgtgcagccgtatta
ggtgcaggtatcatgggtggcggcattgcttaccaatcagcgctaaaaggtgtgccagtc
ttgatgaaagacatcgcacaagcgtcgctcgacctaggcatgactgaagcatctaagctg
ctgaataaacgcttatctcgcggtcgcattgatggctttaagatggcgggtattttagcg
tcaatcacaccgagcttacattacgcaggtattgaaaactctgatgtggttgttgaagct
gtcgttgaaaacccgaaagtaaaagcagcagttttaagtgaagttgaatcccatgtcggt
gacgacaccgttatcacctcaaacacctcgacgattcctatcaacctattggcaaaatca
ctaaaacgcccagaaaacttctgtggtatgcacttcttcaacccagtgcatcgtatgcct
cttgttgagatcatccgtggtgagcacacctctgatgaaaccatcaatcgtgttgtggcg
tatgctgcaaaaatgggcaaatcaccaattgtcgttaatgactgcccagggttcttcgtt
aaccgcgtattgttcccatactttggcggcttcagcatgctacttcgtgatggtgctgac
tttacgaaaatcgacaaagtcatggagcgtaagtttggctggccgatgggaccggcgtac
ttgcttgacgtagtcggcattgataccgcgcaccacgcacaagctgtgatggctgacggt
ttccctgagcgtatgggtaaacaaggtcgtgatgcgattgatgcactgttcgaagcagac
aaatatggtcagaaaaatggtaatggcttctacagctacaccatagataaaaaaggtaag
ccgaagaaaaccttctccgaagcgatcttaccggtacttgctgacgtttgtgccgataag
caggactttgacgatcagaccatcattcaacgtatgatgattccaatgatcaacgaagtg
gtgctgtgcctacaagaaggcatcatcgcgactccgcaggaagcagatatggcattggtt
tatggtcttggtttccctccattccgcggtggcgtattccgctatctagacagcgtgggt
attgctgaatacgttgaaatggcaaaacaacacgccgagctaggtgcgatgtaccaagta
ccgcaaatgctgattgatatggcggcgaaaggtgaaagcttttacggtgcacaacagcaa
ggttctatctaa
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