Vibrio sp. sp1: H9L11_07355
Help
Entry
H9L11_07355 CDS
T11103
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
vip Vibrio sp. sp1
Pathway
vip03030
DNA replication
vip03410
Base excision repair
vip03420
Nucleotide excision repair
vip03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
vip00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
H9L11_07355 (polA)
03410 Base excision repair
H9L11_07355 (polA)
03420 Nucleotide excision repair
H9L11_07355 (polA)
03440 Homologous recombination
H9L11_07355 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
vip03032
]
H9L11_07355 (polA)
03400 DNA repair and recombination proteins [BR:
vip03400
]
H9L11_07355 (polA)
Enzymes [BR:
vip01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
H9L11_07355 (polA)
DNA replication proteins [BR:
vip03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
H9L11_07355 (polA)
DNA repair and recombination proteins [BR:
vip03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
H9L11_07355 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
H9L11_07355 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
DNA_polI_exo1
WHD_BrxR
Motif
Other DBs
NCBI-ProteinID:
QRZ23868
LinkDB
All DBs
Position
1:1554048..1556834
Genome browser
AA seq
928 aa
AA seq
DB search
MASIPENPLILIDGSSYLYRAFHAYPGTMSNGEIPTNAVYGVVNMLRSMMRQFASERIAV
VFDAKGKTFRDDMYAEYKANRPPMPDDLRCQIEPLHNVIRAMGLPLICVPGVEADDVIGT
LAYQASQKGMPVLISTGDKDMAQLVDDNITLINTMTNVVMDREGVVEKFGIPPELIIDYL
ALMGDKVDNIPGVPGVGDKTATALLQGIGGLTKLYENLDDIAGLGFRGSKTMAKKLIDNK
ENAMLSYELATIKLDVELEETPESLLKAEPNKDELVKLYGQLTFKSWLNELLEGGSGSVE
AVELAGSSQASSSQAEMETSAVTIDRSQYETILDKETFNAWLDKLQTAELFAFDTETDNL
DYMLANLVGLSFAVDEGIAAYVPVAHDYLDAPEQLDRDWVLEQLKPILEDAAKAKVGQNL
KYDASVLARYDIELKGIKHDTMLESYIYNSVGGKHDMDSLALRFLQHSCISFEQIAGKGK
NQLTFNQIELEQASPYAAEDADVTLRLHNRLFANIEQDESLKTVYEEIEMPLVPVLSRIE
RTGVFIDEMKLSAQSVEITARLDELEKKAYEIAEQEFNMNSPKQLQAILFEKMGLPVVKK
TPSGTPSTNEEVLQELALDYPLPKLILEYRGLAKLKSTYTDKLPKMINPSTGRVHTSYHQ
AVTATGRLSSTDPNLQNIPIRNEAGRRIRQAFVAPSGHKILAVDYSQIELRIMAHLSGDQ
ALLNAFRDGKDIHAATAAEIMGVSIEDVSSEQRRRAKAVNFGLIYGMSAFGLAKQLGIPR
GEAQAYMDTYFERYPGVMQYMEDTRSTAADKGYVETIFGRRLHLPEIKSRNGMRRKAAER
AAINAPMQGTAADIIKKAMLLVDQWIQEEGNGRVKLLMQVHDELVFEVEESSLSEIESKV
QKLMESAAELKVPLVAEAGHGDNWDQAH
NT seq
2787 nt
NT seq
+upstream
nt +downstream
nt
atggcaagtattcctgaaaatccgttgatccttatcgacggctcttcttacctatatcgc
gcttttcacgcctacccgggcaccatgagcaatggtgaaattccaactaatgccgtttac
ggcgtcgtgaacatgttacgcagcatgatgcgtcagtttgcgtctgagcgcatcgcggtg
gttttcgatgcaaagggaaaaacctttcgtgatgatatgtatgcagaatacaaagcgaat
cgtccgccaatgccggatgacctgcgttgtcaaattgaaccattacacaatgttattcgt
gcaatgggtttgccgctgatctgtgttcctggcgtcgaggcggatgacgtcatcggtacg
ttagcataccaagcatcacaaaagggcatgcctgtattgatcagtactggtgataaagac
atggcgcagctagtggatgataacattaccttgatcaacaccatgacgaacgtcgtaatg
gatcgtgaaggtgtggttgaaaagtttggcattccacctgagttgatcatcgactactta
gcactgatgggcgataaagtagataacattcctggtgtaccgggtgtcggtgataaaaca
gcgaccgcactactgcaaggtattggtggtctgacgaagttgtatgaaaacctcgatgat
attgcagggcttggtttccgtggttctaaaaccatggcgaaaaagctcatcgacaacaaa
gaaaatgccatgctttcgtatgagctcgcgaccatcaaattggatgttgagcttgaggaa
acgccagaatcattgctgaaagcggaaccaaataaagacgaattagtgaagctgtatggc
caactgacgtttaaatcttggttgaatgaactacttgaaggcggttctggatctgtggag
gccgtagagcttgcaggatcttcacaagcttcttcttctcaagccgagatggaaacttct
gcggtaacaatcgatcgcagccaatatgaaacaattctggataaagaaaccttcaatgct
tggctagataaacttcaaacggctgagctgtttgcatttgatacggagaccgataaccta
gattacatgctagcgaatctagttggtttgtcattcgctgtcgatgaaggtattgcggct
tatgtgccagttgcacatgactatttagatgcgcctgaacagcttgatcgtgattgggta
ctagaacagctgaagccaattcttgaagatgcagcgaaagcaaaagtcggtcaaaactta
aagtatgatgcgtctgtactcgctcgttacgacattgagctaaaaggtattaagcacgac
acgatgttggaatcgtatatctacaacagtgtcggcggtaaacacgatatggacagcttg
gcgcttcgcttcctacagcacagctgcatttcttttgagcaaattgcaggtaaaggcaaa
aatcagcttacgtttaaccaaatcgaactggaacaagcatcgccatacgcggcagaagat
gcggatgtgacccttcgtctgcacaatcgcttgtttgctaatatcgagcaggatgaaagc
ctgaagacagtttacgaagagattgaaatgccgttggtgccagttctttcgcgcattgaa
cgcactggggtctttatcgatgaaatgaagctgagtgcgcagtcggtcgagattaccgct
cgccttgatgagcttgaaaagaaagcgtacgaaattgcagagcaagagtttaacatgaac
tcgccaaagcaattacaagccatcctatttgaaaaaatgggtttaccggttgtgaagaaa
acgccatcaggcacaccatcgacgaatgaagaagttctgcaagaactcgcgctagactac
ccactaccaaaactgattttggaataccgtggtttggcgaagctaaaatcaacttacacc
gacaaactgccgaagatgatcaacccatcaacggggcgcgtgcatacttcttaccaccaa
gcagtgactgcaacgggtcgtctatcttctactgatccgaacttacagaacattccaatt
cgtaacgaagctggccgtcgtattcgtcaagcgtttgtcgcgccatcagggcataaaatc
ttagcggtcgactactcgcaaatcgaactgcgcatcatggcgcacctttctggcgaccaa
gctttattgaatgcattccgtgatggcaaagatatccacgcggcaaccgcagcagaaatc
atgggtgtttctattgaggacgtttcaagtgagcaacgtcgtcgtgcgaaagcggttaat
ttcggtcttatttacggcatgagtgcgtttggtttggcgaagcaattaggcattcctcgt
ggtgaggctcaagcgtacatggatacatactttgaacgttacccaggcgtgatgcagtac
atggaagacacacgcagcacagcagcagataaagggtatgttgaaacgatttttggtcga
cgtttgcatttgccagaaatcaaatcgcgcaacgggatgcgtcgtaaagctgctgaacgt
gcggcaatcaacgcaccaatgcaaggtacggcagcggacatcattaagaaagcgatgctg
ttggttgatcagtggattcaggaagaaggcaatggtcgtgtgaagttattaatgcaagta
cacgatgaattggtctttgaagttgaagagtcatcattgtccgaaattgaaagtaaagta
cagaaattgatggaatctgcagcagagctaaaagtaccgttggttgcagaagcaggtcac
ggtgataactgggatcaagctcattag
DBGET
integrated database retrieval system
