KEGG   Vibrio sp. sp1: H9L11_08085
Entry
H9L11_08085       CDS       T11103                                 
Symbol
rfbB
Name
(GenBank) dTDP-glucose 4,6-dehydratase
  KO
K01710  dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
Organism
vip  Vibrio sp. sp1
Pathway
vip00521  Streptomycin biosynthesis
vip00523  Polyketide sugar unit biosynthesis
vip00525  Acarbose and validamycin biosynthesis
vip00541  Biosynthesis of various nucleotide sugars
vip01100  Metabolic pathways
vip01110  Biosynthesis of secondary metabolites
vip01250  Biosynthesis of nucleotide sugars
Module
vip_M00793  dTDP-L-Rha biosynthesis, Glc-1P => dTDP-L-Rha
Brite
KEGG Orthology (KO) [BR:vip00001]
 09100 Metabolism
  09107 Glycan biosynthesis and metabolism
   00541 Biosynthesis of various nucleotide sugars
    H9L11_08085 (rfbB)
  09109 Metabolism of terpenoids and polyketides
   00523 Polyketide sugar unit biosynthesis
    H9L11_08085 (rfbB)
   01055 Biosynthesis of vancomycin group antibiotics
    H9L11_08085 (rfbB)
  09110 Biosynthesis of other secondary metabolites
   00521 Streptomycin biosynthesis
    H9L11_08085 (rfbB)
   00525 Acarbose and validamycin biosynthesis
    H9L11_08085 (rfbB)
Enzymes [BR:vip01000]
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.1  Hydro-lyases
    4.2.1.46  dTDP-glucose 4,6-dehydratase
     H9L11_08085 (rfbB)
SSDB
Motif
Pfam: GDP_Man_Dehyd Epimerase Polysacc_synt_2 3Beta_HSD NAD_binding_4 RmlD_sub_bind adh_short KR
Other DBs
NCBI-ProteinID: QRZ21198
LinkDB
Position
1:complement(1715288..1716391)
AA seq 367 aa
MKQRNLLVTGGAGFIGANYALYWLANHPQDKVVVLDALTYAGNRANLSSVEDHPNFTFVH
GDICDTNLIEELLKAYQLDTIVHFAAESHVDRSITGPDAFIETNILGTYSLLKAAKKVWI
DEPKAQGSAPLPHRFHHVSTDEVYGTLEPNDPAFTEETAYAPNSPYSASKAASDHLVRAY
HHTYGLEVTTSNCSNNYGPYHFPEKLIPLIITNILHDKPLPIYGDGQQIRDWLYVEDHAR
GIELVLEKGRIGENYNIGGHNEWANIDIVNVICQLMNQYFTGEAELPALSHLELQAKYPL
ATKVAAGDAQALITFVTDRAGHDRRYAIDATKTNQELGYKPAESFETGIQKTVEWYLTND
AWWKALI
NT seq 1104 nt   +upstreamnt  +downstreamnt
atgaaacaacgtaatctattagtcactggcggcgcaggttttattggcgctaactatgca
ctttattggctagcgaatcatccacaagacaaagtcgtagttttggatgctctcacttat
gctggcaaccgagccaatttaagctctgtagaagaccacccaaacttcacctttgttcac
ggcgacatttgcgacactaacctcattgaagagctattaaaagcatatcagttagatact
attgtccattttgcagcggaatcacacgtcgaccgctccatcaccggaccagatgcgttt
attgaaaccaacattctaggtacctacagcctactgaaagcagccaaaaaagtatggatc
gatgaaccaaaggcacaaggttcagcgccgctgccacaccgtttccaccatgtttcgact
gatgaagtatacggcacactagagcctaacgacccagcgtttaccgaagagacagcctac
gcgcctaattcaccatattcggcatcaaaggccgcgtcagaccacctggtgcgtgcctac
caccacacttacggcctggaagtgaccacttcaaactgctctaacaactatggtccttat
cacttcccagagaagctgattccgctgataatcaccaatattttgcacgacaagcctctg
ccaatttatggcgacggccaacaaattcgtgattggctatacgtagaagatcacgctcgc
ggcattgagctggtactggaaaaaggccgcattggtgaaaactacaacattggtggccac
aacgagtgggcgaacatcgatattgttaacgtcatctgtcaattgatgaaccaatacttt
accggtgaagcagaactgcctgctctttctcaccttgaattacaagccaaatacccactt
gcgacaaaagtagccgcaggtgacgcgcaagcgctaattacctttgttaccgaccgcgct
gggcacgatcgccgttatgccattgacgccacaaaaaccaatcaagagttaggttataaa
cctgccgaatcgtttgaaacgggtatccaaaaaaccgtggaatggtatttaaccaacgat
gcttggtggaaggcattaatctaa

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