Vibrio sp. sp1: H9L11_08085
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Entry
H9L11_08085 CDS
T11103
Symbol
rfbB
Name
(GenBank) dTDP-glucose 4,6-dehydratase
KO
K01710
dTDP-glucose 4,6-dehydratase [EC:
4.2.1.46
]
Organism
vip Vibrio sp. sp1
Pathway
vip00521
Streptomycin biosynthesis
vip00523
Polyketide sugar unit biosynthesis
vip00525
Acarbose and validamycin biosynthesis
vip00541
Biosynthesis of various nucleotide sugars
vip01100
Metabolic pathways
vip01110
Biosynthesis of secondary metabolites
vip01250
Biosynthesis of nucleotide sugars
Module
vip_M00793
dTDP-L-Rha biosynthesis, Glc-1P => dTDP-L-Rha
Brite
KEGG Orthology (KO) [BR:
vip00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
H9L11_08085 (rfbB)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
H9L11_08085 (rfbB)
01055 Biosynthesis of vancomycin group antibiotics
H9L11_08085 (rfbB)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
H9L11_08085 (rfbB)
00525 Acarbose and validamycin biosynthesis
H9L11_08085 (rfbB)
Enzymes [BR:
vip01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.46 dTDP-glucose 4,6-dehydratase
H9L11_08085 (rfbB)
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GFIT
Motif
Pfam:
GDP_Man_Dehyd
Epimerase
Polysacc_synt_2
3Beta_HSD
NAD_binding_4
RmlD_sub_bind
adh_short
KR
Motif
Other DBs
NCBI-ProteinID:
QRZ21198
LinkDB
All DBs
Position
1:complement(1715288..1716391)
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AA seq
367 aa
AA seq
DB search
MKQRNLLVTGGAGFIGANYALYWLANHPQDKVVVLDALTYAGNRANLSSVEDHPNFTFVH
GDICDTNLIEELLKAYQLDTIVHFAAESHVDRSITGPDAFIETNILGTYSLLKAAKKVWI
DEPKAQGSAPLPHRFHHVSTDEVYGTLEPNDPAFTEETAYAPNSPYSASKAASDHLVRAY
HHTYGLEVTTSNCSNNYGPYHFPEKLIPLIITNILHDKPLPIYGDGQQIRDWLYVEDHAR
GIELVLEKGRIGENYNIGGHNEWANIDIVNVICQLMNQYFTGEAELPALSHLELQAKYPL
ATKVAAGDAQALITFVTDRAGHDRRYAIDATKTNQELGYKPAESFETGIQKTVEWYLTND
AWWKALI
NT seq
1104 nt
NT seq
+upstream
nt +downstream
nt
atgaaacaacgtaatctattagtcactggcggcgcaggttttattggcgctaactatgca
ctttattggctagcgaatcatccacaagacaaagtcgtagttttggatgctctcacttat
gctggcaaccgagccaatttaagctctgtagaagaccacccaaacttcacctttgttcac
ggcgacatttgcgacactaacctcattgaagagctattaaaagcatatcagttagatact
attgtccattttgcagcggaatcacacgtcgaccgctccatcaccggaccagatgcgttt
attgaaaccaacattctaggtacctacagcctactgaaagcagccaaaaaagtatggatc
gatgaaccaaaggcacaaggttcagcgccgctgccacaccgtttccaccatgtttcgact
gatgaagtatacggcacactagagcctaacgacccagcgtttaccgaagagacagcctac
gcgcctaattcaccatattcggcatcaaaggccgcgtcagaccacctggtgcgtgcctac
caccacacttacggcctggaagtgaccacttcaaactgctctaacaactatggtccttat
cacttcccagagaagctgattccgctgataatcaccaatattttgcacgacaagcctctg
ccaatttatggcgacggccaacaaattcgtgattggctatacgtagaagatcacgctcgc
ggcattgagctggtactggaaaaaggccgcattggtgaaaactacaacattggtggccac
aacgagtgggcgaacatcgatattgttaacgtcatctgtcaattgatgaaccaatacttt
accggtgaagcagaactgcctgctctttctcaccttgaattacaagccaaatacccactt
gcgacaaaagtagccgcaggtgacgcgcaagcgctaattacctttgttaccgaccgcgct
gggcacgatcgccgttatgccattgacgccacaaaaaccaatcaagagttaggttataaa
cctgccgaatcgtttgaaacgggtatccaaaaaaccgtggaatggtatttaaccaacgat
gcttggtggaaggcattaatctaa
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