Vibrio sp. sp1: H9L11_09315
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Entry
H9L11_09315 CDS
T11103
Symbol
ung
Name
(GenBank) uracil-DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
vip Vibrio sp. sp1
Pathway
vip03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
vip00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
H9L11_09315 (ung)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
vip03400
]
H9L11_09315 (ung)
Enzymes [BR:
vip01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
H9L11_09315 (ung)
DNA repair and recombination proteins [BR:
vip03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
H9L11_09315 (ung)
Prokaryotic type
H9L11_09315 (ung)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
QRZ21432
LinkDB
All DBs
Position
1:1977616..1978296
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AA seq
226 aa
AA seq
DB search
MNQSPTWHDVIGEEKKQSYFVDTLNFVEAERAAGKAIFPPAKDVFNAFRFTEFKDVKVVI
LGQDPYHGPNQAHGLCFSVLPGIKTPPSLVNMYKELAQDIEGFQIPQHGFLQSWAEQGVL
LLNTVLTVEQGKAHSHSKTGWETFTDRVIEAINQHQEGVVFLLWGSHAQKKGRFIDRNKH
HVLAAPHPSPLSAHRGFFGCKHFSQANQLLTSQEKAPINWHLPLTV
NT seq
681 nt
NT seq
+upstream
nt +downstream
nt
atgaatcagtcacccacttggcacgatgtgatcggcgaagagaaaaagcagagctacttt
gtagacaccttgaattttgttgaagccgaacgcgccgcaggcaaagctatttttcctccc
gcaaaagatgtctttaacgcgtttcgttttaccgagttcaaagacgttaaggtcgtgatt
ctaggacaagacccataccacggcccaaatcaggcgcatggcctgtgtttctctgtactt
cctggcattaaaacgccaccgtcactggttaatatgtataaagagctggcgcaagatatt
gaaggtttccaaatccctcagcatggttttttgcaaagctgggctgagcaaggcgtattg
ttactcaatacggtattaacggtggagcaaggtaaagcgcattcacattcaaagacaggt
tgggaaacgtttactgatcgagttattgaagccattaatcagcatcaagaaggtgtagtg
ttcttgctgtgggggtcacacgcgcagaagaaagggcgctttatcgatcgcaataaacac
catgtcttggcagcaccgcatccatcgccgttatcggcacatcgaggctttttcggttgt
aagcatttctctcaagcaaaccagttgcttacatcacaagaaaaagcaccaattaactgg
catttgccattaacggtataa
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