Vibrio sp. sp1: H9L11_09410
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Entry
H9L11_09410 CDS
T11103
Symbol
rppH
Name
(GenBank) RNA pyrophosphohydrolase
KO
K08311
putative (di)nucleoside polyphosphate hydrolase [EC:3.6.1.-]
Organism
vip Vibrio sp. sp1
Pathway
vip03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
vip00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
H9L11_09410 (rppH)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
vip03019
]
H9L11_09410 (rppH)
Messenger RNA biogenesis [BR:
vip03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
H9L11_09410 (rppH)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
NUDIX
NUDIX_4
Nudt16-like
Motif
Other DBs
NCBI-ProteinID:
QRZ21451
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All DBs
Position
1:1998676..1999197
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AA seq
173 aa
AA seq
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MIDGDGYRLNVGIVICNNHGQVFWAKRYGQHSWQFPQGGIDEGETPEQAMFRELYEEVGL
TKKDVKIIATSRHWLRYKLPKRLVRWDSKPVCIGQKQKWFLLRLECDESRINMQRGKSPE
FDGWRWVSYWYPVRQVVSFKRDVYRRAMKEFASLAMPFRERKAKGKRKKQRRG
NT seq
522 nt
NT seq
+upstream
nt +downstream
nt
gtgatagatggcgatggttaccgacttaatgttggtattgtgatatgtaataaccatggt
caggtcttctgggctaaacgatacgggcaacactcatggcaatttccacaaggtgggatt
gacgaaggtgaaacccctgaacaagccatgttcagggagttatatgaagaagtcggttta
acgaaaaaagacgttaagatcattgcaacaagtcgtcattggttaagatataagctacca
aagcgattggtgcgttgggactccaagcctgtttgtatcggccaaaaacagaaatggttt
ctgctgagattagaatgcgatgagtctcgcattaatatgcaacgcggaaaatcccctgaa
tttgatggttggcgctgggtaagttactggtatccagttaggcaagttgtttctttcaag
cgagatgtttatcgacgagcgatgaaagaatttgcatccttagccatgccttttcgagag
agaaaagcgaaagggaaaagaaaaaagcaacgtagaggataa
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