Vibrio sp. sp1: H9L11_12015
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Entry
H9L11_12015 CDS
T11103
Symbol
xthA
Name
(GenBank) exodeoxyribonuclease III
KO
K01142
exodeoxyribonuclease III [EC:
3.1.11.2
]
Organism
vip Vibrio sp. sp1
Pathway
vip03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
vip00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
H9L11_12015 (xthA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
vip03400
]
H9L11_12015 (xthA)
Enzymes [BR:
vip01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
H9L11_12015 (xthA)
DNA repair and recombination proteins [BR:
vip03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
H9L11_12015 (xthA)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Exo_endo_phos
YozE_SAM_like
DUF3014
Motif
Other DBs
NCBI-ProteinID:
QRZ21913
LinkDB
All DBs
Position
1:complement(2553110..2553916)
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AA seq
268 aa
AA seq
DB search
MKVISFNINGLRARLHQLQALIDKHQPDVIGLQEIKVHDEAFPIEAVEAMGYKVYFHGQK
AHYGVAMLCKQEPLHVQKGFPTDNEEHQKRMIMATFLNENGEKVTVLNGYFPQGDNISHE
TKFPYKRQFYKDLMTYLNDHHNNDEQLIVMGDINISPIDADIGIGEPNRKRWLKTGKCSF
QPEEREWLKTLLDWGFVDTFRKLYPEVNDQFSWFDYRSRGFDDNRGLRIDVILATPSLAE
KCIESGIDYELRGIEKPSDHAPIWSTFK
NT seq
807 nt
NT seq
+upstream
nt +downstream
nt
atgaaagtaatcagctttaacatcaatggactacgtgcgcgactgcaccaactccaagcg
ctaatcgacaaacaccaacctgatgtgattggtcttcaggaaattaaagttcacgatgaa
gcattcccgattgaagctgtcgaagccatgggctacaaagtgtatttccatggtcaaaaa
gcacattacggcgtagcaatgctttgtaagcaagagcctctacacgtacaaaaagggttc
ccgacggataacgaggaacatcaaaagcgcatgatcatggcaacgtttttaaatgaaaac
ggcgaaaaggtcactgtgctaaacggctatttccctcaaggggataacatcagccacgaa
accaaattcccatacaagcgccaattctataaagatctgatgacctacctaaacgatcat
cacaataacgacgagcaattgattgttatgggtgacatcaacatcagccctattgatgca
gatatcggtatcggcgaaccaaaccgtaaacgttggctaaaaacaggtaaatgttcattc
caacctgaagagcgcgaatggttgaaaaccttactagactggggctttgtggacaccttc
cgtaagctatacccagaggtgaacgatcaattttcgtggtttgactaccgttctcgcggt
tttgatgataaccgtggcctacgaattgatgtcattttggcaaccccttctctagcggaa
aagtgtattgaatctggtatcgactatgagcttcgtggtatcgagaagccttcagatcac
gcaccaatctggtcaacatttaagtaa
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integrated database retrieval system
