Vibrio sp. sp1: H9L11_12200
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Entry
H9L11_12200 CDS
T11103
Symbol
cmoB
Name
(GenBank) tRNA 5-methoxyuridine(34)/uridine 5-oxyacetic acid(34) synthase CmoB
KO
K15257
tRNA (mo5U34)-methyltransferase [EC:2.1.1.-]
Organism
vip Vibrio sp. sp1
Brite
KEGG Orthology (KO) [BR:
vip00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
vip03016
]
H9L11_12200 (cmoB)
Transfer RNA biogenesis [BR:
vip03016
]
Prokaryotic type
tRNA modification factors
Methyltransferases
H9L11_12200 (cmoB)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Methyltransf_9
Methyltransf_23
Methyltransf_31
Methyltransf_12
Methyltransf_25
Methyltransf_11
CMAS
MTS
NpmA
PCMT
Motif
Other DBs
NCBI-ProteinID:
QRZ21948
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All DBs
Position
1:complement(2596166..2597137)
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AA seq
323 aa
AA seq
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MFNFANFYQLIAQDTRLQPWLNVLPQQLTDWQNAEHGDFGRWLKALNKIPAGRPDNIDIV
DSVTISNNEPMPQGELKKLESLLRTFHPWRKGPYNVHGIHIDTEWRSDWKWDRVLPHISP
LKNRSVLDVGCGNGYHMWRMLGEGARLTVGIDPSHLFLIQFEAIRKLMGDDQRAHLLPLG
IEQLPKLEAFDTVFSMGVLYHRRSPLDHLVQLKDQLVSGGELVLETLVIEGDENAVLVPT
SRYAQMRNVYFFPSAKALKVWLELVGFEDVRIVDENITSVDEQRTTDWMTHNSLPDYLDP
NDPSKTVEGYPAPRRAVLVARKS
NT seq
972 nt
NT seq
+upstream
nt +downstream
nt
atgtttaactttgcaaatttctaccaattgattgcccaagacacccgtcttcaaccttgg
cttaatgtgcttccacaacagctaacggattggcaaaatgcagagcacggtgactttggt
cgctggttgaaagccctgaacaaaatcccagcgggtagaccggacaacatcgacattgtt
gattctgtcacgatttcaaacaatgagcccatgcctcaaggggaacttaaaaagctagaa
agcttacttcgtacattccatccttggcgcaaaggcccatacaacgtacacggcatccat
attgatactgagtggcgcagtgattggaaatgggaccgcgtgcttccgcatatttcacca
ttaaagaatcgcagcgtactcgatgtaggttgtggtaacggctaccacatgtggcgcatg
ctaggcgaaggtgcacgcttaactgtcggtatcgatccatctcacctgttcctgattcag
ttcgaagcaattcgtaaactaatgggcgatgaccaacgtgcacacctactgccattgggc
attgaacaactacctaagttagaagcgttcgatacggtattcagcatgggcgtgctttac
catcgccgctcgcctctcgatcatttagtgcaactaaaagatcaattggtatctggaggt
gaactcgtattggaaacactcgtgattgaaggtgatgagaatgcagtactggtcccgact
tctcgttacgcgcaaatgcgtaatgtctatttcttcccttcagcaaaagccctaaaagtg
tggctagaattggtcggttttgaagatgttcgtatcgttgatgaaaacatcacatccgta
gatgaacaacgtaccacagattggatgacgcataactctctacctgactacttagatccg
aacgacccaagcaaaactgtagaaggctatcctgcccctcgccgcgcggttcttgtcgct
cgcaaatcataa
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