Vibrio sp. sp1: H9L11_12235
Help
Entry
H9L11_12235 CDS
T11103
Symbol
ruvB
Name
(GenBank) Holliday junction branch migration DNA helicase RuvB
KO
K03551
holliday junction DNA helicase RuvB [EC:
5.6.2.4
]
Organism
vip Vibrio sp. sp1
Pathway
vip03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
vip00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
H9L11_12235 (ruvB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
vip03400
]
H9L11_12235 (ruvB)
Enzymes [BR:
vip01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
H9L11_12235 (ruvB)
DNA repair and recombination proteins [BR:
vip03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
H9L11_12235 (ruvB)
RecFOR pathway proteins
H9L11_12235 (ruvB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RuvB_N
AAA_lid_4
RuvB_C
AAA
AAA_5
Mg_chelatase
AAA_16
AAA_14
AAA_22
AAA_3
nSTAND3
Rad17
NTPase_1
RNA_helicase
Bac_DnaA
AAA_18
ABC_tran
DUF815
TniB
NB-ARC
Sigma54_activ_2
AAA_24
TIP49
AAA_17
AAA_28
NPHP3_N
bpMoxR
TsaE
AAA_PrkA
ATP-synt_ab
Motif
Other DBs
NCBI-ProteinID:
QRZ24052
LinkDB
All DBs
Position
1:2603438..2604442
Genome browser
AA seq
334 aa
AA seq
DB search
MIEADRLIAPENPAFRDEDVIDRAIRPKKLADYQGQDHVRDQMEIFIKAAQLRSEALDHL
LIFGPPGLGKTTLANIVANEMEVNIRTTSGPVLEKAGDLAALLTNLEENDVLFIDEIHRL
SPMVEEVLYPAMEDYQLDIMIGEGPAARSIKIDLPPFTLIGATTRAGSLTSPLRDRFGIT
QRLEFYKIKDLQDIVQRSADCLGLSMEPEGALEVARRARGTPRIANRLLRRVRDYAEVKG
NGHICADVADKALNMLDVDAEGFDYMDRKLLLAIMEKFGGGPVGLDNMAAAIGEEKDTIE
DVLEPYLIQQGYLQRTPRGRIATDRAYLHFGIEK
NT seq
1005 nt
NT seq
+upstream
nt +downstream
nt
atgattgaagccgatcgtttaatcgcgccagaaaaccctgcctttcgtgatgaagatgtc
attgatcgtgctattcggccaaaaaaattagcggattaccaaggtcaggaccatgttcgt
gaccaaatggagatcttcattaaagctgctcagttacgtagcgaagcacttgatcacctt
ttgatttttggtcccccaggtttgggtaaaaccacacttgcgaatatcgttgccaatgaa
atggaagtgaacattcgcactacttcaggccctgtacttgagaaagcaggcgatttggcc
gcgctgttaaccaaccttgaagaaaacgatgtgttgttcatcgatgagattcaccgcttg
agtccgatggttgaagaggtgctatatccggcgatggaagattatcaactggatattatg
atcggtgaaggtccggccgctcgttctattaagatcgatttaccaccgtttacgttaatt
ggtgcgacgacccgagcgggctctttaacgtcaccattgcgcgaccgctttggtattact
cagcgccttgagttttataagataaaagacctccaagatatcgtgcagcgaagcgcggat
tgtttaggtttatcaatggaacctgaaggtgcattggaagtggcaagacgtgcgcgtggc
acgccacgtattgctaaccgtttgctacgccgtgttcgtgattatgcggaagtaaaaggc
aatggtcacatttgcgccgatgttgccgataaggcgttgaatatgcttgatgtggacgcc
gaaggcttcgattacatggaccgtaagctactactcgcgattatggaaaaatttggtggt
ggtccggtcgggctcgacaacatggcagcggcgataggtgaagaaaaggacactattgaa
gacgttcttgaaccttatcttattcagcaaggttatttacaacgcactccgcgtggaaga
atcgcgacagatcgtgcgtatttgcatttcggaattgaaaaataa
DBGET
integrated database retrieval system
