Vibrio sp. sp1: H9L11_12950
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Entry
H9L11_12950 CDS
T11103
Name
(GenBank) DEAD/DEAH box helicase
KO
K19789
DNA repair protein RadD
Organism
vip Vibrio sp. sp1
Brite
KEGG Orthology (KO) [BR:
vip00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
vip03400
]
H9L11_12950
DNA repair and recombination proteins [BR:
vip03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factor
H9L11_12950
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Other DBs
NCBI-ProteinID:
QRZ22093
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Position
1:complement(2754447..2756198)
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AA seq
583 aa
AA seq
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MYTLRPYQADSVKAVIHYFRKHSTPAVIVLPTGAGKSLVIAELARLAKGRVLVLAHVKEL
VEQNHAKYEGYGLKGSIFSAGLGRKETDQQVVFASVQSVVRNLDSFKNQFSLLVIDECHR
VPDDKNSSYQKVITHLRELNPGIKVLGLTATPYRLGMGWIYQYHTRGQVRTEEPRFFRDC
IFELPIRYLLDENFLTPARMMDAPVLSYDFSQLKPANTGRYKEAEMDMVIDKAKRATPQI
VEQIMQYAKERQGVMIFAATVRHAQEIHSLLPEGETEIVIGDTPTPERDAIIQAFKNRQI
KYLVNVSVLTTGFDAPHVDLIAILRPTESVSLYQQIVGRGLRLSDGKSECLVLDYAGNSY
DLYQPEVGDPKPDSDSEIITIPCPACGFNNNFWGKLDSNGFLVEHFGRRCQGYFEDEDTG
EREHCGYRFRAKYCGECGADNDIAARICHECDATLVDPDKKLKEALNLKDALIFECTEMD
LSVFKSSDGKSQLKVTYSGEPYQGEGNALVHEFWTLSTKKQKQTFKDQFVRPHLADKHRP
FEEASPTRVVANQHRFRLPQFVIARKSGRFWKLRDKIFEDELK
NT seq
1752 nt
NT seq
+upstream
nt +downstream
nt
atgtacacacttcgtccttatcaagccgactcggttaaagccgttattcattactttcgt
aaacactcgacaccagcagtgatcgtgctgccaaccggtgccgggaaaagcttggtgatc
gcagaacttgctcgccttgcgaaaggacgagtgttagtcctcgcccacgtaaaagaactg
gtcgagcaaaaccacgcaaagtatgaaggttatggtttaaaaggttccatcttctcagca
ggattgggacgaaaagaaactgaccagcaagtcgtgtttgcttcggttcaatcggtcgta
cgtaacttagattcgttcaaaaaccagttttctctgctcgttattgatgagtgccatcgt
gtgccagatgacaaaaacagcagctaccaaaaagttattactcacttacgagaactgaac
cctggcattaaggtgctgggactaactgcaacgccctatcgtttaggaatgggctggatt
tatcagtatcacacccgaggtcaagtgcgaaccgaagagcctcgattcttccgcgattgt
attttcgaactgccgatccgttacttgctcgacgaaaacttcctcactccagcccgcatg
atggatgcgcccgttttgtcttacgacttctctcagctgaagcccgctaacaccggacgc
tacaaagaagcagaaatggacatggtgatcgataaagccaaacgtgcgactccacaaatt
gttgagcaaatcatgcaatatgcgaaagagcgtcaaggtgtcatgatcttcgctgcaact
gttcgacacgcacaggagatacacagtttattgccagaaggcgaaactgaaatcgtcatt
ggtgatacacctacgccggagcgcgatgcgatcatccaagcgttcaagaatcgtcaaata
aaatacttagtcaatgtttcggtactgacaaccgggtttgatgcgccgcatgtcgattta
atcgcgattttgcgaccaacagagtcagtcagtctgtaccaacagatagtaggacgagga
ttacgcttatcagacggaaaatcagaatgtttagtgcttgattacgcaggcaacagctac
gatttataccaacctgaagtcggtgatcccaaaccagactctgacagtgaaattatcacg
attccttgcccggcttgcggattcaataacaacttctggggtaagttggatagtaacggt
ttcttggttgaacattttggcagacgttgccaaggttactttgaagatgaagacacaggc
gaacgtgaacactgtggctaccgttttcgtgccaaatactgcggtgaatgtggtgcggac
aacgatatcgctgcacgaatttgtcatgagtgtgatgcgacgctcgtagacccagataaa
aagctaaaagaagcccttaatctcaaagatgcattaatctttgaatgcacagaaatggac
ctatctgtatttaagtccagtgatggtaaatctcagctaaaggtgacgtattctggtgaa
ccataccaaggcgaaggcaatgcgttagttcatgagttttggacattgagtaccaaaaaa
caaaaacaaacgtttaaagatcagttcgtacgcccccacttagcagacaagcatcgccct
tttgaagaggcttcaccgacacgcgttgtcgctaatcaacatcgtttccgtttgcctcag
tttgttattgctagaaaatctggtcgcttttggaagctgcgagataaaatttttgaagat
gagttgaaataa
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