Vibrio sp. sp1: H9L11_15850
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Entry
H9L11_15850 CDS
T11103
Symbol
groL
Name
(GenBank) chaperonin GroEL
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
vip Vibrio sp. sp1
Pathway
vip03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
vip00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
H9L11_15850 (groL)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
vip03019
]
H9L11_15850 (groL)
03110 Chaperones and folding catalysts [BR:
vip03110
]
H9L11_15850 (groL)
03029 Mitochondrial biogenesis [BR:
vip03029
]
H9L11_15850 (groL)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
vip04147
]
H9L11_15850 (groL)
Enzymes [BR:
vip01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
H9L11_15850 (groL)
Messenger RNA biogenesis [BR:
vip03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
H9L11_15850 (groL)
Chaperones and folding catalysts [BR:
vip03110
]
Heat shock proteins
HSP60 / Chaperonin
H9L11_15850 (groL)
Mitochondrial biogenesis [BR:
vip03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
H9L11_15850 (groL)
Exosome [BR:
vip04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
H9L11_15850 (groL)
Exosomal proteins of other body fluids (saliva and urine)
H9L11_15850 (groL)
Exosomal proteins of breast cancer cells
H9L11_15850 (groL)
Exosomal proteins of colorectal cancer cells
H9L11_15850 (groL)
Exosomal proteins of bladder cancer cells
H9L11_15850 (groL)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-ProteinID:
QRZ24882
LinkDB
All DBs
Position
2:complement(82715..84313)
Genome browser
AA seq
532 aa
AA seq
DB search
MAAKDVLFANDARQKMLKGVNLLADAVKVTLGPKGRNVVLDKSYGAPTITKDGVSVAKEI
ELKDKFENMGAQMVKQVASKANDEAGDGTTTATVLAQSFINEGLKAVASGMNPMDLKRGI
DKATEAAVEKLREMSKPCSDKESITQVGSISANSDRAIGEIIAEAMEKVGRNGVITVEEG
QGLNNELSVVEGMQFDRGYLSPYFITNQENGSVELDNPYILLVDKKVSSIRELLPVLEEV
AKSSRSLLIIAEDIEGEALATLVVNNMRGIVRATAVKAPGFGDNRKAMMEDIAVLTAGTV
ISEEIGLELEKATLEQLGSAKKVTITKDTTTIVGGAAEASAIADRVASIEKQIETTTSQY
DKDKLQQRVAKLSGGVAVIKIGAATEVEMKEKKDRVDDALHATRAAVEEGIVAGGGVALT
KIAKELADLKGDNDDQNVGIRVALRAMEEPLRQIATNAGDEASVVANAVKAGDSDYGYNA
ATGEYGNMIEMGVLDPAKVTRSALQFAASVAGLMITTEAMITNHVEDKELDI
NT seq
1599 nt
NT seq
+upstream
nt +downstream
nt
atggctgcaaaagacgtattatttgctaatgacgcacgtcaaaaaatgctgaaaggtgtg
aacttactggcggacgcagtaaaagtgacactaggcccgaaaggccgcaacgttgtgctt
gataaatcttacggcgcgccaaccatcaccaaagatggcgtgtctgtagcgaaagaaatc
gaactgaaagataagttcgaaaacatgggcgcacaaatggtgaaacaagtggcgtccaaa
gcgaatgatgaagcgggggacggtacaacgaccgctaccgtactggcgcaatctttcatc
aatgaaggtcttaaagcggtagcctctggcatgaacccaatggacctaaaacgtggtatc
gacaaagccactgaagcggcggttgagaaactacgtgaaatgtctaagccatgcagcgac
aaagaatctatcacccaagtgggtagcatttctgcaaacagcgatcgcgcgatcggtgaa
atcattgcagaagcgatggagaaagtgggtcgcaatggcgtgattacggttgaagaaggc
caaggtctaaacaacgaattgtctgtggttgaaggtatgcaatttgaccgcggttacttg
tcgccatacttcatcactaaccaagaaaatggcagcgtcgagctagacaacccttacatc
ctattggtggacaaaaaagtcagcagcatccgcgagctattgcctgtactagaagaagtg
gcgaaatcttctcgttcgctattgatcattgctgaagacatcgaaggtgaagcgctagcg
acattggttgtgaacaacatgcgcggcatcgtgcgtgcgaccgcggtgaaagcgcctggc
tttggtgacaaccgtaaagcgatgatggaagacattgcggtactaactgctggtacggtc
atctctgaagaaatcggcctagagctcgaaaaagcaacgttagagcaactaggtagtgcg
aagaaagtgaccatcaccaaagacacaacaaccattgtgggtggcgcagcagaagcaagc
gcgattgctgatcgtgtggcttcgattgaaaaacaaatcgaaacaaccacctctcaatac
gataaagacaagcttcaacaacgtgttgcgaagctttctggcggcgtagcggtgatcaag
atcggcgctgcaaccgaagttgagatgaaagagaagaaagatcgcgtggacgatgcacta
cacgctactcgcgcagcggttgaagaaggtattgttgctggtggtggtgttgccctaact
aagatcgcgaaagaattggcggatctaaaaggcgacaatgatgaccaaaacgtgggtatc
cgagttgcgctacgtgcaatggaagagcctcttcgtcaaatcgcaactaacgcaggtgac
gaagcttctgttgtggcgaacgctgtcaaagctggtgattccgattacggttacaacgct
gcaacaggtgaatacggcaacatgatcgaaatgggcgtcttggaccctgcgaaagtaaca
cgctcagcgcttcaattcgctgcgtctgttgctggcttgatgatcaccactgaagcgatg
atcaccaaccacgttgaagacaaagaacttgatatctaa
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