KEGG   Vibrio sp. sp1: H9L11_20540
Entry
H9L11_20540       CDS       T11103                                 
Symbol
tssM
Name
(GenBank) type VI secretion system membrane subunit TssM
  KO
K11891  type VI secretion system protein ImpL
Organism
vip  Vibrio sp. sp1
Pathway
vip03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:vip00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    H9L11_20540 (tssM)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:vip02044]
    H9L11_20540 (tssM)
Secretion system [BR:vip02044]
 Type VI secretion system
  Imp/Vas secretion system core components
   H9L11_20540 (tssM)
SSDB
Motif
Pfam: IcmF-related_N IcmF-related IcmF_C IcmF_helical nSTAND_NTPase5 AAA_22 AAA_28 AAA_24 AAA AAA_19
Other DBs
NCBI-ProteinID: QRZ24249
LinkDB
Position
2:1141232..1144750
AA seq 1172 aa
MRIKEIGRIFTQRWFLGLIGVAACSIFIWVVGPLIAIAGYEPLKSDFQRLVTILVLVLLW
AIFNVTKQHKQKVKEDESIQTLLEVDSQSDKEAASEIDLMRERIEQAVKVVTKTHKGKRS
LYDLPWYVLIGPPGTGKTTVLKQSGLEFPLGDSLGSDSIAGVGGTRHCDWWFANKAVLID
TAGRYTTQDSQEKVDSKAWHGFLGLLKKYRTQRPINGAIVTISLASVMSQTRTERSLHAR
AIKSRLQELKNQLGMQFPIYVLLTKMDLVAGFNEFFADLSKEERDDLFGFMFPREVDDER
GVISLFNKEFHGMLERLDARMLRILETEDDLDKRALIFEFPKQLRVLQANLDEFLAEIFA
QNSFEEPALIRGVFMLSSVQEGLPVDKLMNESTNGLGLNRLALAKSQTGSHSYFVKNLFD
KVIFKEQLLGTVNRHYQKQSGWMRRGVYIGCTTLLLGASALWFMSYKWNSQLIVDTNEQA
SHIDALIGAQSLDFEADIVSAVETLDRLMTLPLGKQSNYGDADSVKRFGLYQGDKVSQAA
NNAYSDALTQYFAPLLLDSLVSEMESNQQHREYLYETLKTYLMLFNPDKYQQDEVLAWFN
FYFERQYPGELNADLRRRLLQHTQYLLGNDGQGFTYNTAAVTSAREVLTQMSLPERAYQR
MKIQFSKSHVPSFRLTDVLGPKGLEQFERASGKPLSQGISGFYTYNGFHSIFQIQINRTV
KSLMEENWVYGDDLKAHEIDQDSAIQGVQSRYYQDYVNEWKTLIEDIQLKQAPSLELATE
QARVLSGVERPIESLLRAIQKEVALSKVSLSENQKAASEVAGKVAKVKFSNTADRLDMYL
PEENGFNVALPGKEVESHFSEILRLGEQDFDDIQQAMINLRSYLSDLSSSGNNQKIAYKS
ILDGTVTQDVAASFARAKELLPRPFNQWLGELSQESVKFAESGSKDHLNQLWVTQVVRPY
QRTIAGRYPFEPNASREVRLKDFKRFFGYGGTLDAFFQEYLEPFVDTSKSRWRLEKEIGV
RPETLMVFQRAQRIRQSFFESDNSLRVEFGMKPVYLDQHITRFVLELGGQDLVYKHGPAR
AKSLSWPAGQDQTRIVFTPPESKREIAHTYEGEWGIFKLLDQSLKARPESRKDNIVMIDL
KGNKVQLELIPSSAINPFWSNEMERFRCPRTL
NT seq 3519 nt   +upstreamnt  +downstreamnt
atgcgtattaaagaaattggcagaatatttactcaaagatggtttctcggtcttatcggt
gtcgctgcttgttctattttcatttgggttgttggtccacttattgcgatagcgggatat
gagcccctaaagagtgactttcaacggctagtcactattctagtgttggtgttgctttgg
gcgatatttaacgttaccaagcagcataagcaaaaggtgaaagaagacgaaagtattcaa
acgttgcttgaggttgatagccaatcagataaagaagcagcaagtgaaattgacttaatg
cgcgagcgtattgagcaagctgtcaaagtagtgacgaaaacacacaaaggcaagagaagc
ttgtatgacttaccgtggtatgtgttgattggccctcctggaacggggaaaacaaccgta
ttaaagcagtcggggttagagtttccattaggagacagccttggctctgactctattgcc
ggtgtaggtggcactcgccactgtgattggtggtttgcaaataaagcagttcttatagat
acggctggccggtatacgacacaagacagtcaagaaaaggtcgactctaaagcgtggcat
ggtttcttaggattgttgaaaaagtatagaacgcaaagaccaattaatggtgcgattgtt
acgataagtttagccagcgtgatgtctcagactcgaaccgagcgaagtcttcatgctcga
gcaattaagtcgagacttcaagaactgaaaaaccagttaggcatgcagtttccgatttac
gtattgctcaccaaaatggatttagttgccggtttcaatgaattctttgccgatttaagt
aaggaagaacgagatgatttatttggtttcatgttccctcgtgaagtggatgatgaaaga
ggcgttatttctctattcaacaaagaatttcatggcatgttggagcgccttgatgcccgt
atgcttagaatacttgaaactgaggacgatttagataaacgcgcgcttatctttgaattt
ccaaagcaattaagagtgctacaagctaatcttgacgagtttttagctgaaatttttgca
caaaacagttttgaagagcctgccttgattcgtggtgtgtttatgttgagttcggttcaa
gaaggcttaccagtcgataagctgatgaatgaatcaaccaatggacttgggttaaatcgt
ttagctctagcaaagagtcagactggttctcatagttatttcgtaaagaatctttttgac
aaggttattttcaaagagcaactgttaggaacagttaatcgtcactatcaaaagcagtca
ggttggatgcgtcgaggtgtttacattggatgtacaacgctactgctaggagcttctgcg
ctttggtttatgagttataagtggaactcacagttaattgtcgataccaatgaacaagcg
agccatattgatgcactgattggcgctcaaagtttagattttgaagcggatattgtttca
gctgtagaaacattagataggttgatgacgcttcctctcggaaagcaaagcaactacggt
gatgccgactctgtaaagaggtttggtctctatcaaggagacaaagtatctcaggcggca
aacaatgcatattctgatgctttgacccaatatttcgcccctttgcttcttgatagcctg
gtgtcagaaatggagagcaatcaacagcatcgtgagtatttgtacgaaacgttaaaaacg
tatttgatgttattcaatccagacaaatatcaacaagatgaagtgttggcttggtttaac
ttttatttcgaacgtcaatatccgggtgagctaaacgcagacttaagaagacgcttgcta
cagcacactcaatatttattaggcaacgatggacaaggctttacttacaacactgctgcc
gtgacgagtgctcgagaagtgttgactcaaatgtctctacctgaacgtgcttatcagcga
atgaaaatacaattttctaagagtcatgtaccttcatttcgcttgactgatgtattggga
cctaaagggcttgagcagttcgagcgagctagtggaaaaccgctatcacaaggcatttcg
ggtttctacacgtacaatggttttcatagcatttttcagattcagatcaaccgtacagta
aaaagcctaatggaagagaactgggtttatggtgacgatcttaaggctcatgaaattgat
caagatagtgccatccaaggcgttcagtctcgatactatcaagattatgttaatgaatgg
aaaacgttgatcgaagatattcaattgaagcaggctccgagcctagaacttgcgacagag
caagcgagggttttatctggagttgaaagaccaatcgaatctttgttgagagcaatccaa
aaagaggttgctctatcaaaagtatcattgtcagaaaatcaaaaagccgcttctgaagtt
gctggtaaagttgccaaagttaagttttcaaatacggcagatagactagacatgtattta
cctgaagaaaacggtttcaatgttgctctgccaggtaaagaagtcgaatcacatttctca
gagattttacgccttggtgagcaagactttgatgatattcaacaagcaatgattaacttg
cgttcgtatttaagtgacttatcaagctctggtaacaatcagaaaattgcctacaaaagt
attttagatggaaccgttacacaagatgtcgcagcttcctttgctcgtgctaaagaactt
ttgccgagaccatttaatcaatggctaggtgagctttctcaagagtcggtcaagtttgcg
gagagcggttcgaaggatcatctaaatcaactttgggtaacacaagtggtgcgcccttat
cagcggactattgctggcagatatccattcgagcccaatgcgagcagagaagtcagattg
aaagactttaagcgattctttggttatgggggcacgcttgacgcattcttccaagaatac
ctcgaaccgtttgtggatacttcgaaaagtcgttggcgattagaaaaggaaattggagtt
cgtccagaaacactaatggtctttcaaagagcgcaacgtatcaggcagtctttctttgaa
tctgataattcattacgcgtagagtttggtatgaagcctgtttatctagaccagcacatt
actcgatttgtcttagagttgggtggacaagatttggtttataagcatggaccagcaaga
gctaaatcgttgagttggcctgccggtcaagatcagactcgaattgtgttcacaccacct
gaatctaaacgcgaaattgcgcatacctatgaaggtgagtggggcatattcaagcttttg
gatcaatcacttaaagcaaggccagaatcgcgtaaagacaatatagttatgattgattta
aagggaaacaaggtgcaactagagcttattccttctagtgccattaatccgttttggtca
aatgaaatggagaggttcagatgtccacgaaccttataa

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