Vibrio sp. sp1: H9L11_21495
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Entry
H9L11_21495 CDS
T11103
Symbol
gcvP
Name
(GenBank) aminomethyl-transferring glycine dehydrogenase
KO
K00281
glycine cleavage system P protein (glycine dehydrogenase) [EC:
1.4.4.2
]
Organism
vip Vibrio sp. sp1
Pathway
vip00260
Glycine, serine and threonine metabolism
vip00630
Glyoxylate and dicarboxylate metabolism
vip00670
One carbon pool by folate
vip00785
Lipoic acid metabolism
vip01100
Metabolic pathways
vip01110
Biosynthesis of secondary metabolites
vip01200
Carbon metabolism
Module
vip_M00621
Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:
vip00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
H9L11_21495 (gcvP)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
H9L11_21495 (gcvP)
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
H9L11_21495 (gcvP)
00670 One carbon pool by folate
H9L11_21495 (gcvP)
Enzymes [BR:
vip01000
]
1. Oxidoreductases
1.4 Acting on the CH-NH2 group of donors
1.4.4 With a disulfide as acceptor
1.4.4.2 glycine dehydrogenase (aminomethyl-transferring)
H9L11_21495 (gcvP)
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Motif
Pfam:
GDC-P
GcvP2_C
Beta_elim_lyase
Aminotran_5
RNase_H2-Ydr279
Motif
Other DBs
NCBI-ProteinID:
QRZ24430
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Position
2:1357155..1360019
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AA seq
954 aa
AA seq
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MTELLQSLSTQNEFVARHNGPNKSDQQKMLEAINAVSLDSLIDETVPAQIRLEQPMSLAE
AKSEADMLAAMRKFADQNQVKRTFIGQGYYNTFTPNVILRNVMENPGWYTAYTPYQPEIS
QGRLEALLNYQQMVMDLTGMEIANASLLDEATAAAEAMTLCKRAGKSKSNVFFVADDVHP
QTIEVVKTRAKFIGFEVLVGSLESLPEQDVFGALVQYPSTTGEVRDLTDIIAKAQANKTL
VTVATDLLASTLLKPAGEMGADVAIGSAQRFGVPMGYGGPHAAFMATRDKHKRTMPGRVI
GVSIDTNGNQALRMAMQTREQHIRREKATSNICTAQALLANMASFYAVYHGAEGLRTIAR
RTHHMTAILAAGLTKGGFELAHNSFFDTITINTGAQTEDLYAKALAADINLRKLGTQLGV
SFDETTTVADVEALFAVFGVKEEVAVLSTEIAGNEFAAIPEALRRTTEYLTHPVFNTHHS
ETQMMRYLKQLENKDFSLTHGMIPLGSCTMKLNAAAEMIPVTWPEFGSIHPFAPAEQAAG
YAALAKDLKEKLCEITGYDAFSLQPNSGASGEYAGLIAIQRYHESRGEGHRNVCLIPSSA
HGTNPATASMVSMKVVVVKCDEEGNIDIDDLAAKIEKHKDNLSSIMITYPSTHGVYEEKV
KEVCEMVHAAGGQVYLDGANMNAQVGLTSPGFIGSDVSHLNLHKTFCIPHGGGGPGMGPI
GVKSHLAPFLPGHIEDGVEGADFAVSAADMGSASILPISWAYIAMMGEAGLTDATKVAIL
NANYVMETLRQHYPVLYRGKNGRVAHECIIDIRPLKEETGISEEDIAKRLMDYGFHAPTM
SFPVAGTLMVEPTESEDLEELDRFCDAMIAIREEMEKVKNGEWPLDNNPLVNAPHTQVDL
SAEDWDRPYSREIGCFPSKATKSWKYWPTVNRVDNVYGDRNLICSCPGIDNYED
NT seq
2865 nt
NT seq
+upstream
nt +downstream
nt
atgactgaattacttcaaagcctcagcacacaaaacgagttcgttgctcgccacaatgga
ccaaacaaatctgaccaacagaaaatgttggaagcgatcaacgcagttagcctagattcg
cttatcgacgaaaccgtaccagcacaaattcgcctagagcaaccaatgagcttggcagaa
gcgaaaagcgaagcagacatgctggcagcaatgcgtaagttcgccgatcagaaccaagtt
aaacgtacattcattggtcagggttactacaacaccttcacgccgaacgtgattctacgc
aacgtgatggaaaacccgggctggtacaccgcttacaccccttaccaaccagagatctca
caaggtcgtttagaagcacttctaaactaccaacaaatggtgatggatcttactggtatg
gaaatcgcgaacgcgtcattgcttgatgaagcaacggcagccgcagaagcgatgacactt
tgtaagcgtgcgggtaaaagcaagagcaacgtattcttcgttgctgacgacgttcaccca
caaaccatcgaagtggtaaaaactcgtgcgaaattcatcggctttgaagtcttggttggt
tctttagaatcactaccagagcaagacgtgttcggcgcactagttcaatacccaagtaca
acaggtgaagttcgtgacctaacggacatcatcgctaaagcgcaagcaaacaaaacacta
gtgactgtagcaacggaccttcttgcttctaccctacttaaacctgcaggtgaaatgggc
gcagacgtagcaatcggttcagcacaacgttttggcgtgccgatgggttacggcggtcca
cacgctgctttcatggcaacgcgtgataagcacaagcgtacaatgcctggtcgcgttatc
ggtgtttctatcgataccaacggtaaccaagcactgcgtatggcaatgcaaacgcgtgaa
cagcacatccgtcgtgaaaaagcgacttcaaacatctgtactgctcaagcactgctagcg
aacatggcgtctttctacgcggtttaccacggcgcagaaggtctacgcacgattgctcgt
cgtacgcaccacatgacagccatcctagccgctggcctaactaaaggcggcttcgagctt
gctcacaacagcttcttcgacaccatcactatcaacacaggtgcacaaactgaagaccta
tacgcgaaagcactagccgcagacatcaacctacgtaagttgggtactcagctaggtgtg
agcttcgacgaaaccacaaccgtggcagatgtagaagccctattcgcagtattcggtgtg
aaagaagaagtcgcagtactatcaactgaaatcgcaggcaacgagtttgcagccattcca
gaagcattgcgccgcacaacagaatatctaacacaccctgtgtttaacacgcaccacagc
gaaacacagatgatgcgttacctaaaacagctagagaacaaagacttctcactcacgcac
ggcatgatcccactgggcagctgtacgatgaagctgaacgcagcagcagagatgattcca
gtaacttggcctgagtttggttcgatccacccgttcgcaccagcagaacaagcagctggt
tacgctgcactcgcaaaagaccttaaagaaaagctatgtgaaatcactggctatgacgca
ttctcactacaaccaaactctggtgcatcgggtgagtacgcaggtcttatcgcgattcaa
cgctaccacgaaagccgtggcgaaggtcaccgcaacgtatgtttgatcccaagctctgcg
cacggtactaaccctgcgacagcatctatggtgtcaatgaaagtggttgtggttaagtgt
gatgaagaaggcaacatcgacatcgacgacctagcagcgaaaatcgagaaacacaaagac
aacctatcaagcattatgatcacttacccttctacgcacggcgtttacgaagagaaagtg
aaagaagtgtgtgaaatggttcatgccgctggtggtcaggtttacctagacggcgctaac
atgaacgcgcaggttggtctaacatcaccaggcttcatcggttcagacgtttctcaccta
aacctacacaaaaccttctgcatcccgcacggtggtggcggtccgggtatgggtcctatc
ggtgtgaaatctcacctagctcctttcttaccagggcatattgaagacggtgtagaaggc
gcagatttcgcagtatcagcagcagatatgggtagcgcttctatcctgcctatctcttgg
gcttacatcgcaatgatgggcgaagctggcctaacagatgctacaaaagtagcaattctg
aacgcaaactacgtgatggaaacacttcgccaacactaccctgttctttaccgtggcaaa
aatggccgcgtagcgcacgaatgtattatcgacattcgtccgctgaaagaagaaacaggt
atcagcgaagaagacatcgcgaagcgtctaatggactacggtttccacgcaccaactatg
tcgttccctgtagcgggcacgctaatggttgagccaacggaatcggaagatctagaagag
ctggaccgcttctgtgatgcgatgatcgctatccgcgaagaaatggagaaagtgaaaaac
ggtgaatggccactggataacaacccacttgttaacgcgccacacacacaagttgatctt
tcagctgaagattgggaccgcccttactctcgcgagattggctgcttcccgtctaaagcg
accaaatcttggaagtactggccaacggtaaaccgcgtagataacgtatacggcgaccgt
aacctaatctgttcatgcccaggcatcgataactacgaagattaa
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