KEGG   Vibrio sp. sp1: H9L11_21575
Entry
H9L11_21575       CDS       T11103                                 
Name
(GenBank) 3'-5' exonuclease
  KO
K02342  DNA polymerase III subunit epsilon [EC:2.7.7.7]
Organism
vip  Vibrio sp. sp1
Pathway
vip03030  DNA replication
vip03430  Mismatch repair
vip03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:vip00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    H9L11_21575
   03430 Mismatch repair
    H9L11_21575
   03440 Homologous recombination
    H9L11_21575
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:vip03032]
    H9L11_21575
   03400 DNA repair and recombination proteins [BR:vip03400]
    H9L11_21575
Enzymes [BR:vip01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     H9L11_21575
DNA replication proteins [BR:vip03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     H9L11_21575
DNA repair and recombination proteins [BR:vip03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     H9L11_21575
SSDB
Motif
Pfam: RNase_T Rv2179c-like RNase_H_2 DNA_pol_A_exo1
Other DBs
NCBI-ProteinID: QRZ24445
LinkDB
Position
2:1372540..1373154
AA seq 204 aa
MPQANSVVVLDFETTGLSPTLGDRAIEIGAVKLVNGEVVDSFQQLMNPGFRVSSFIENYT
GITNNMLRSAPSCEEVMASFSEFIAGENLIAHNASFDKRFLDAELERINCGYSGEFACSL
LVARRLIQEAPSHKLGELVRYKNIDNDGVFHRALADAQMTAKLWLLMVEGIENSGVEKPS
FQLMQTVSKTAKGKVDLLLAKSRA
NT seq 615 nt   +upstreamnt  +downstreamnt
atgcctcaagcaaactctgtggtcgtactcgactttgaaaccacaggtctctctcctact
ttaggtgatcgcgcaatagaaattggtgcagtaaagttagtcaatggcgaggttgtcgat
agttttcagcaactcatgaatcccggtttcagagtgagttctttcattgagaactacacc
ggcattaccaacaatatgttgcgatcggcaccaagctgcgaagaggtaatggcgtcattt
agtgagttcattgcaggcgaaaaccttatcgctcacaacgcgtccttcgataaacgattt
ttagatgcggagcttgaacgaatcaactgtggttattcgggtgagtttgcttgctcctta
ctagtggcaagacggctcattcaagaagccccatcacataagctaggtgaacttgttcgc
tataaaaatatcgacaacgacggtgttttccaccgagcactagccgatgcgcaaatgaca
gccaagctttggctcttaatggtcgaagggatagaaaactcaggcgtcgaaaaaccaagt
tttcagttgatgcaaacggtcagtaaaacagccaaaggaaaagtcgacctgctactcgcc
aaaagccgtgcgtaa

DBGET integrated database retrieval system